Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Brca1P48754 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Brca1P48754 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Brca1P48754 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Brca1P48754 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Brca1P48754 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Brca1P48754 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Brca1P48754 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Brca1P48754 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.54■□□□□ 0.72
Brca1P48754 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Brca1P48754 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.54■□□□□ 0.72
Brca1P48754 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Brca1P48754 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Brca1P48754 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Brca1P48754 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Brca1P48754 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Brca1P48754 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Brca1P48754 AC161829.1-201ENSMUST00000220298 281 ntBASIC19.53■□□□□ 0.72
Brca1P48754 Rps4l-201ENSMUST00000071745 943 ntBASIC19.53■□□□□ 0.72
Brca1P48754 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Brca1P48754 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Brca1P48754 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Brca1P48754 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Brca1P48754 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.53■□□□□ 0.72
Brca1P48754 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.53■□□□□ 0.72
Brca1P48754 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Brca1P48754 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Brca1P48754 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Brca1P48754 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.53■□□□□ 0.72
Brca1P48754 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.53■□□□□ 0.72
Brca1P48754 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Brca1P48754 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Brca1P48754 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Brca1P48754 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Brca1P48754 Gm9449-201ENSMUST00000207265 1011 ntBASIC19.53■□□□□ 0.72
Brca1P48754 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Brca1P48754 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Brca1P48754 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Brca1P48754 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.53■□□□□ 0.72
Brca1P48754 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Brca1P48754 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Brca1P48754 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Brca1P48754 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.52■□□□□ 0.72
Brca1P48754 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Brca1P48754 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Brca1P48754 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Brca1P48754 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.52■□□□□ 0.72
Brca1P48754 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Brca1P48754 Gm18195-201ENSMUST00000207604 706 ntBASIC19.52■□□□□ 0.72
Brca1P48754 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.52■□□□□ 0.72
Brca1P48754 AC138767.1-201ENSMUST00000222661 415 ntBASIC19.52■□□□□ 0.72
Brca1P48754 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Brca1P48754 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Brca1P48754 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Brca1P48754 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Brca1P48754 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Brca1P48754 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Brca1P48754 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.51■□□□□ 0.71
Brca1P48754 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.51■□□□□ 0.71
Brca1P48754 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Brca1P48754 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.51■□□□□ 0.71
Brca1P48754 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Brca1P48754 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Brca1P48754 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Brca1P48754 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Brca1P48754 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.51■□□□□ 0.71
Brca1P48754 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Brca1P48754 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Brca1P48754 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Brca1P48754 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.51■□□□□ 0.71
Brca1P48754 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.51■□□□□ 0.71
Brca1P48754 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Brca1P48754 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Brca1P48754 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Brca1P48754 Gm10052-201ENSMUST00000168019 960 ntBASIC19.5■□□□□ 0.71
Brca1P48754 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.5■□□□□ 0.71
Brca1P48754 Gm7729-201ENSMUST00000050143 801 ntBASIC19.5■□□□□ 0.71
Brca1P48754 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brca1P48754 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Brca1P48754 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Brca1P48754 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Brca1P48754 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Brca1P48754 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brca1P48754 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brca1P48754 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Brca1P48754 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brca1P48754 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.49■□□□□ 0.71
Brca1P48754 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brca1P48754 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brca1P48754 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brca1P48754 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Brca1P48754 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brca1P48754 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Brca1P48754 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brca1P48754 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Brca1P48754 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Brca1P48754 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brca1P48754 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brca1P48754 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brca1P48754 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms