Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gli1P47806 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Gli1P47806 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Gli1P47806 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Gli1P47806 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Gli1P47806 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Gli1P47806 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.96■□□□□ 0.3
Gli1P47806 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.96■□□□□ 0.3
Gli1P47806 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.96■□□□□ 0.3
Gli1P47806 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Gli1P47806 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Gli1P47806 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Gli1P47806 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.96■□□□□ 0.3
Gli1P47806 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Gli1P47806 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gli1P47806 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Gli1P47806 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gli1P47806 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
Gli1P47806 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gli1P47806 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gli1P47806 Gm13836-201ENSMUST00000121159 501 ntBASIC16.95■□□□□ 0.3
Gli1P47806 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Gli1P47806 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Gli1P47806 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.95■□□□□ 0.3
Gli1P47806 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Gli1P47806 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gli1P47806 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.95■□□□□ 0.3
Gli1P47806 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gli1P47806 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gli1P47806 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gli1P47806 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.95■□□□□ 0.3
Gli1P47806 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.95■□□□□ 0.3
Gli1P47806 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gli1P47806 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gli1P47806 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.95■□□□□ 0.3
Gli1P47806 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.95■□□□□ 0.3
Gli1P47806 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gli1P47806 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gli1P47806 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gli1P47806 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gli1P47806 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gli1P47806 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Gli1P47806 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gli1P47806 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Gli1P47806 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.94■□□□□ 0.3
Gli1P47806 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Gli1P47806 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gli1P47806 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Gli1P47806 Gm6576-201ENSMUST00000169678 883 ntBASIC16.94■□□□□ 0.3
Gli1P47806 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Gli1P47806 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gli1P47806 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gli1P47806 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gli1P47806 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gli1P47806 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Gli1P47806 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Gli1P47806 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gli1P47806 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Gli1P47806 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Gli1P47806 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gli1P47806 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.93■□□□□ 0.3
Gli1P47806 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.93■□□□□ 0.3
Gli1P47806 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.93■□□□□ 0.3
Gli1P47806 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Gli1P47806 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gli1P47806 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Gli1P47806 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.93■□□□□ 0.3
Gli1P47806 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.93■□□□□ 0.3
Gli1P47806 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.93■□□□□ 0.3
Gli1P47806 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Gli1P47806 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gli1P47806 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gli1P47806 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Gli1P47806 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gli1P47806 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.92■□□□□ 0.3
Gli1P47806 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Gli1P47806 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gli1P47806 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gli1P47806 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Gli1P47806 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gli1P47806 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gli1P47806 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gli1P47806 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gli1P47806 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gli1P47806 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.91■□□□□ 0.3
Gli1P47806 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Gli1P47806 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Gli1P47806 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Gli1P47806 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Gli1P47806 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gli1P47806 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gli1P47806 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gli1P47806 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gli1P47806 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gli1P47806 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Gli1P47806 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Gli1P47806 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.9■□□□□ 0.3
Gli1P47806 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gli1P47806 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gli1P47806 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms