Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.51■□□□□ 0.71
Sdc2P43407 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.51■□□□□ 0.71
Sdc2P43407 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc2P43407 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc2P43407 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc2P43407 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc2P43407 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc2P43407 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc2P43407 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc2P43407 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc2P43407 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc2P43407 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc2P43407 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc2P43407 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc2P43407 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc2P43407 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc2P43407 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc2P43407 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc2P43407 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sdc2P43407 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sdc2P43407 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sdc2P43407 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sdc2P43407 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sdc2P43407 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Sdc2P43407 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.5■□□□□ 0.71
Sdc2P43407 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.5■□□□□ 0.71
Sdc2P43407 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Sdc2P43407 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Sdc2P43407 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sdc2P43407 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.5■□□□□ 0.71
Sdc2P43407 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sdc2P43407 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sdc2P43407 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sdc2P43407 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sdc2P43407 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Sdc2P43407 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Sdc2P43407 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sdc2P43407 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sdc2P43407 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sdc2P43407 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sdc2P43407 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sdc2P43407 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sdc2P43407 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Sdc2P43407 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sdc2P43407 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.49■□□□□ 0.71
Sdc2P43407 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Sdc2P43407 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sdc2P43407 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sdc2P43407 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.49■□□□□ 0.71
Sdc2P43407 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sdc2P43407 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sdc2P43407 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.48■□□□□ 0.71
Sdc2P43407 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.48■□□□□ 0.71
Sdc2P43407 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.48■□□□□ 0.71
Sdc2P43407 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sdc2P43407 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Sdc2P43407 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sdc2P43407 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.48■□□□□ 0.71
Sdc2P43407 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sdc2P43407 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sdc2P43407 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sdc2P43407 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Sdc2P43407 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sdc2P43407 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sdc2P43407 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sdc2P43407 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sdc2P43407 Gm10138-203ENSMUST00000206952 366 ntBASIC19.47■□□□□ 0.71
Sdc2P43407 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sdc2P43407 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sdc2P43407 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Sdc2P43407 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Sdc2P43407 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc2P43407 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc2P43407 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Sdc2P43407 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc2P43407 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Sdc2P43407 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc2P43407 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc2P43407 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc2P43407 Mir6349-201ENSMUST00000184059 97 ntBASIC19.46■□□□□ 0.71
Sdc2P43407 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc2P43407 Gm10602-201ENSMUST00000098239 609 ntBASIC19.46■□□□□ 0.71
Sdc2P43407 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc2P43407 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc2P43407 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc2P43407 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc2P43407 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Sdc2P43407 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Sdc2P43407 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc2P43407 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc2P43407 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc2P43407 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sdc2P43407 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Sdc2P43407 Dio3-201ENSMUST00000097228 1449 ntBASIC19.45■□□□□ 0.7
Sdc2P43407 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Sdc2P43407 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sdc2P43407 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.45■□□□□ 0.7
Sdc2P43407 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.45■□□□□ 0.7
Sdc2P43407 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sdc2P43407 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms