Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Timp3P39876 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.22□□□□□ -0.13
Timp3P39876 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Timp3P39876 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Timp3P39876 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Timp3P39876 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Timp3P39876 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Timp3P39876 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Timp3P39876 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Timp3P39876 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Timp3P39876 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.22□□□□□ -0.13
Timp3P39876 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Timp3P39876 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Timp3P39876 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Timp3P39876 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.22□□□□□ -0.13
Timp3P39876 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Timp3P39876 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Timp3P39876 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Timp3P39876 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Timp3P39876 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Timp3P39876 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Timp3P39876 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Timp3P39876 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Timp3P39876 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Timp3P39876 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Timp3P39876 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Timp3P39876 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Timp3P39876 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Timp3P39876 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
Timp3P39876 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Timp3P39876 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Timp3P39876 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Timp3P39876 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Timp3P39876 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Timp3P39876 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Timp3P39876 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Timp3P39876 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Timp3P39876 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.21□□□□□ -0.13
Timp3P39876 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Timp3P39876 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.21□□□□□ -0.13
Timp3P39876 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Timp3P39876 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.21□□□□□ -0.13
Timp3P39876 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.21□□□□□ -0.13
Timp3P39876 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Timp3P39876 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Timp3P39876 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Timp3P39876 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Timp3P39876 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Timp3P39876 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.21□□□□□ -0.13
Timp3P39876 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Timp3P39876 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.21□□□□□ -0.13
Timp3P39876 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Timp3P39876 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Timp3P39876 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Timp3P39876 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.21□□□□□ -0.14
Timp3P39876 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Timp3P39876 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Timp3P39876 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.2□□□□□ -0.14
Timp3P39876 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Timp3P39876 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Timp3P39876 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Timp3P39876 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Timp3P39876 Gm6433-201ENSMUST00000118634 875 ntBASIC14.2□□□□□ -0.14
Timp3P39876 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Timp3P39876 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Timp3P39876 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.2□□□□□ -0.14
Timp3P39876 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Timp3P39876 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.2□□□□□ -0.14
Timp3P39876 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Timp3P39876 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Timp3P39876 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Timp3P39876 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Timp3P39876 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.2□□□□□ -0.14
Timp3P39876 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Timp3P39876 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Timp3P39876 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Timp3P39876 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Timp3P39876 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Timp3P39876 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Timp3P39876 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Timp3P39876 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Timp3P39876 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Timp3P39876 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Timp3P39876 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Timp3P39876 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Timp3P39876 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Timp3P39876 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Timp3P39876 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Timp3P39876 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Timp3P39876 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.19□□□□□ -0.14
Timp3P39876 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Timp3P39876 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Timp3P39876 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.19□□□□□ -0.14
Timp3P39876 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.19□□□□□ -0.14
Timp3P39876 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Timp3P39876 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Timp3P39876 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Timp3P39876 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Timp3P39876 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Timp3P39876 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms