Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Fen1P39749 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Fen1P39749 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Fen1P39749 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Fen1P39749 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.49■□□□□ 0.39
Fen1P39749 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Fen1P39749 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Fen1P39749 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.49■□□□□ 0.39
Fen1P39749 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.49■□□□□ 0.39
Fen1P39749 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Fen1P39749 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.49■□□□□ 0.39
Fen1P39749 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.49■□□□□ 0.39
Fen1P39749 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Fen1P39749 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Fen1P39749 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Fen1P39749 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Fen1P39749 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.49■□□□□ 0.39
Fen1P39749 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Fen1P39749 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Fen1P39749 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.49■□□□□ 0.39
Fen1P39749 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Fen1P39749 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Fen1P39749 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Fen1P39749 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Fen1P39749 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Fen1P39749 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Fen1P39749 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Fen1P39749 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Fen1P39749 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Fen1P39749 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Fen1P39749 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Fen1P39749 Gm26571-201ENSMUST00000181399 666 ntBASIC17.48■□□□□ 0.39
Fen1P39749 Gm27405-201ENSMUST00000184201 112 ntBASIC17.48■□□□□ 0.39
Fen1P39749 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Fen1P39749 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.48■□□□□ 0.39
Fen1P39749 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Fen1P39749 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Fen1P39749 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Fen1P39749 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Fen1P39749 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Fen1P39749 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Fen1P39749 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Fen1P39749 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Fen1P39749 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Fen1P39749 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Fen1P39749 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.47■□□□□ 0.39
Fen1P39749 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Fen1P39749 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Fen1P39749 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Fen1P39749 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Fen1P39749 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Fen1P39749 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Fen1P39749 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.47■□□□□ 0.39
Fen1P39749 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Fen1P39749 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Fen1P39749 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Fen1P39749 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Fen1P39749 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Fen1P39749 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Fen1P39749 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Fen1P39749 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Fen1P39749 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.46■□□□□ 0.39
Fen1P39749 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Fen1P39749 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Fen1P39749 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.46■□□□□ 0.39
Fen1P39749 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Fen1P39749 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Fen1P39749 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Fen1P39749 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Fen1P39749 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Fen1P39749 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
Fen1P39749 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.46■□□□□ 0.39
Fen1P39749 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Fen1P39749 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.46■□□□□ 0.39
Fen1P39749 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Fen1P39749 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.46■□□□□ 0.39
Fen1P39749 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Fen1P39749 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.46■□□□□ 0.38
Fen1P39749 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Fen1P39749 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Fen1P39749 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Fen1P39749 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Fen1P39749 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Fen1P39749 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Fen1P39749 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Fen1P39749 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Fen1P39749 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.45■□□□□ 0.38
Fen1P39749 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.45■□□□□ 0.38
Fen1P39749 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.45■□□□□ 0.38
Fen1P39749 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Fen1P39749 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Fen1P39749 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Fen1P39749 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Fen1P39749 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Fen1P39749 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Fen1P39749 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Fen1P39749 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Fen1P39749 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Fen1P39749 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Fen1P39749 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms