Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh4P39038 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh4P39038 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.61■□□□□ 0.25
Cdh4P39038 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cdh4P39038 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh4P39038 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cdh4P39038 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Cdh4P39038 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh4P39038 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Cdh4P39038 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh4P39038 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cdh4P39038 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh4P39038 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh4P39038 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh4P39038 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cdh4P39038 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh4P39038 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh4P39038 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh4P39038 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh4P39038 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh4P39038 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.6■□□□□ 0.25
Cdh4P39038 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Cdh4P39038 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh4P39038 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh4P39038 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh4P39038 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cdh4P39038 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh4P39038 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh4P39038 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.6■□□□□ 0.25
Cdh4P39038 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh4P39038 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh4P39038 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh4P39038 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
Cdh4P39038 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Cdh4P39038 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh4P39038 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Cdh4P39038 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Cdh4P39038 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Cdh4P39038 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh4P39038 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Cdh4P39038 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh4P39038 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh4P39038 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.59■□□□□ 0.25
Cdh4P39038 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh4P39038 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh4P39038 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.59■□□□□ 0.25
Cdh4P39038 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh4P39038 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Cdh4P39038 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh4P39038 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh4P39038 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh4P39038 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh4P39038 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh4P39038 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.59■□□□□ 0.25
Cdh4P39038 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh4P39038 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cdh4P39038 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cdh4P39038 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Cdh4P39038 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.58■□□□□ 0.25
Cdh4P39038 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Cdh4P39038 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdh4P39038 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdh4P39038 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.58■□□□□ 0.24
Cdh4P39038 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cdh4P39038 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cdh4P39038 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.58■□□□□ 0.24
Cdh4P39038 Mir8112-201ENSMUST00000184382 131 ntBASIC16.58■□□□□ 0.24
Cdh4P39038 Odf3b-204ENSMUST00000227834 930 ntBASIC16.58■□□□□ 0.24
Cdh4P39038 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdh4P39038 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cdh4P39038 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cdh4P39038 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdh4P39038 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdh4P39038 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdh4P39038 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.58■□□□□ 0.24
Cdh4P39038 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Cdh4P39038 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdh4P39038 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdh4P39038 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdh4P39038 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdh4P39038 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh4P39038 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh4P39038 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh4P39038 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Cdh4P39038 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh4P39038 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh4P39038 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh4P39038 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh4P39038 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh4P39038 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Cdh4P39038 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.57■□□□□ 0.24
Cdh4P39038 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.57■□□□□ 0.24
Cdh4P39038 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.57■□□□□ 0.24
Cdh4P39038 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.57■□□□□ 0.24
Cdh4P39038 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh4P39038 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Cdh4P39038 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh4P39038 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Cdh4P39038 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh4P39038 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms