Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.3■□□□□ 0.36
LdlrP35951 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LdlrP35951 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LdlrP35951 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
LdlrP35951 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LdlrP35951 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LdlrP35951 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LdlrP35951 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LdlrP35951 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LdlrP35951 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LdlrP35951 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LdlrP35951 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LdlrP35951 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LdlrP35951 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LdlrP35951 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LdlrP35951 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
LdlrP35951 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LdlrP35951 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LdlrP35951 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.29■□□□□ 0.36
LdlrP35951 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LdlrP35951 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.29■□□□□ 0.36
LdlrP35951 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LdlrP35951 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
LdlrP35951 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LdlrP35951 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
LdlrP35951 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.29■□□□□ 0.36
LdlrP35951 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LdlrP35951 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LdlrP35951 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LdlrP35951 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LdlrP35951 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LdlrP35951 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LdlrP35951 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LdlrP35951 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LdlrP35951 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LdlrP35951 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
LdlrP35951 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LdlrP35951 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LdlrP35951 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LdlrP35951 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LdlrP35951 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LdlrP35951 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LdlrP35951 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LdlrP35951 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
LdlrP35951 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LdlrP35951 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LdlrP35951 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LdlrP35951 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LdlrP35951 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LdlrP35951 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LdlrP35951 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LdlrP35951 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LdlrP35951 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
LdlrP35951 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.27■□□□□ 0.36
LdlrP35951 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LdlrP35951 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LdlrP35951 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LdlrP35951 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LdlrP35951 Mir8112-201ENSMUST00000184382 131 ntBASIC17.27■□□□□ 0.36
LdlrP35951 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LdlrP35951 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
LdlrP35951 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LdlrP35951 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
LdlrP35951 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
LdlrP35951 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
LdlrP35951 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LdlrP35951 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LdlrP35951 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LdlrP35951 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LdlrP35951 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LdlrP35951 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
LdlrP35951 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LdlrP35951 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LdlrP35951 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.26■□□□□ 0.35
LdlrP35951 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LdlrP35951 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.26■□□□□ 0.35
LdlrP35951 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.26■□□□□ 0.35
LdlrP35951 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LdlrP35951 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LdlrP35951 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LdlrP35951 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
LdlrP35951 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LdlrP35951 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LdlrP35951 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.26■□□□□ 0.35
LdlrP35951 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.25■□□□□ 0.35
LdlrP35951 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.25■□□□□ 0.35
LdlrP35951 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LdlrP35951 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LdlrP35951 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LdlrP35951 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LdlrP35951 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.25■□□□□ 0.35
LdlrP35951 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.25■□□□□ 0.35
LdlrP35951 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LdlrP35951 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LdlrP35951 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LdlrP35951 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.25■□□□□ 0.35
LdlrP35951 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LdlrP35951 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LdlrP35951 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LdlrP35951 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms