Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a11P31650 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a11P31650 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a11P31650 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a11P31650 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a11P31650 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc6a11P31650 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a11P31650 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a11P31650 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a11P31650 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Slc6a11P31650 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a11P31650 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a11P31650 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a11P31650 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a11P31650 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a11P31650 Gm12896-201ENSMUST00000118430 226 ntBASIC16.5■□□□□ 0.23
Slc6a11P31650 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.5■□□□□ 0.23
Slc6a11P31650 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a11P31650 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a11P31650 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a11P31650 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a11P31650 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a11P31650 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a11P31650 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc6a11P31650 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Slc6a11P31650 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a11P31650 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Slc6a11P31650 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Slc6a11P31650 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.49■□□□□ 0.23
Slc6a11P31650 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a11P31650 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.49■□□□□ 0.23
Slc6a11P31650 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Slc6a11P31650 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a11P31650 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a11P31650 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a11P31650 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a11P31650 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.49■□□□□ 0.23
Slc6a11P31650 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a11P31650 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Slc6a11P31650 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a11P31650 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Slc6a11P31650 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a11P31650 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a11P31650 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a11P31650 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
Slc6a11P31650 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a11P31650 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Slc6a11P31650 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a11P31650 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a11P31650 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a11P31650 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a11P31650 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a11P31650 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.48■□□□□ 0.23
Slc6a11P31650 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.48■□□□□ 0.23
Slc6a11P31650 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a11P31650 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Slc6a11P31650 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a11P31650 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a11P31650 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Slc6a11P31650 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a11P31650 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.48■□□□□ 0.23
Slc6a11P31650 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Slc6a11P31650 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a11P31650 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Slc6a11P31650 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc6a11P31650 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc6a11P31650 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Slc6a11P31650 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Slc6a11P31650 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.47■□□□□ 0.23
Slc6a11P31650 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Slc6a11P31650 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc6a11P31650 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc6a11P31650 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Slc6a11P31650 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc6a11P31650 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc6a11P31650 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc6a11P31650 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc6a11P31650 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc6a11P31650 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a11P31650 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a11P31650 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a11P31650 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a11P31650 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a11P31650 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Slc6a11P31650 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a11P31650 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Slc6a11P31650 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.46■□□□□ 0.23
Slc6a11P31650 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a11P31650 Gm5643-201ENSMUST00000117081 966 ntBASIC16.46■□□□□ 0.23
Slc6a11P31650 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a11P31650 Gm2559-201ENSMUST00000201323 363 ntBASIC16.46■□□□□ 0.23
Slc6a11P31650 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a11P31650 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.46■□□□□ 0.23
Slc6a11P31650 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.46■□□□□ 0.23
Slc6a11P31650 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a11P31650 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.46■□□□□ 0.23
Slc6a11P31650 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a11P31650 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a11P31650 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a11P31650 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms