Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Slc6a13P31649 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a13P31649 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a13P31649 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Slc6a13P31649 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Slc6a13P31649 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a13P31649 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.61■□□□□ 0.41
Slc6a13P31649 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a13P31649 Mir5122-201ENSMUST00000175004 89 ntBASIC17.61■□□□□ 0.41
Slc6a13P31649 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.61■□□□□ 0.41
Slc6a13P31649 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a13P31649 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a13P31649 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Slc6a13P31649 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a13P31649 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a13P31649 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a13P31649 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a13P31649 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a13P31649 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a13P31649 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.61■□□□□ 0.41
Slc6a13P31649 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a13P31649 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.61■□□□□ 0.41
Slc6a13P31649 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a13P31649 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a13P31649 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Slc6a13P31649 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Slc6a13P31649 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a13P31649 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a13P31649 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.6■□□□□ 0.41
Slc6a13P31649 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a13P31649 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a13P31649 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a13P31649 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.6■□□□□ 0.41
Slc6a13P31649 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Slc6a13P31649 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
Slc6a13P31649 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a13P31649 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a13P31649 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a13P31649 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a13P31649 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a13P31649 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Slc6a13P31649 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a13P31649 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a13P31649 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Slc6a13P31649 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.59■□□□□ 0.41
Slc6a13P31649 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.59■□□□□ 0.41
Slc6a13P31649 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a13P31649 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a13P31649 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a13P31649 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a13P31649 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Slc6a13P31649 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a13P31649 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.59■□□□□ 0.41
Slc6a13P31649 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Slc6a13P31649 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Slc6a13P31649 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a13P31649 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a13P31649 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc6a13P31649 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc6a13P31649 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc6a13P31649 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc6a13P31649 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc6a13P31649 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.58■□□□□ 0.4
Slc6a13P31649 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.58■□□□□ 0.4
Slc6a13P31649 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.58■□□□□ 0.4
Slc6a13P31649 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc6a13P31649 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc6a13P31649 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Slc6a13P31649 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.58■□□□□ 0.4
Slc6a13P31649 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Slc6a13P31649 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc6a13P31649 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Slc6a13P31649 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc6a13P31649 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc6a13P31649 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc6a13P31649 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a13P31649 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a13P31649 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a13P31649 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.57■□□□□ 0.4
Slc6a13P31649 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a13P31649 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a13P31649 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a13P31649 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a13P31649 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a13P31649 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.57■□□□□ 0.4
Slc6a13P31649 Gm38027-201ENSMUST00000192315 235 ntBASIC17.57■□□□□ 0.4
Slc6a13P31649 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.57■□□□□ 0.4
Slc6a13P31649 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.57■□□□□ 0.4
Slc6a13P31649 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Slc6a13P31649 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.57■□□□□ 0.4
Slc6a13P31649 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a13P31649 Timm23-208ENSMUST00000226683 750 ntBASIC17.57■□□□□ 0.4
Slc6a13P31649 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.57■□□□□ 0.4
Slc6a13P31649 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a13P31649 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a13P31649 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Slc6a13P31649 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a13P31649 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a13P31649 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a13P31649 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms