Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nfkb1P25799 Idnk-204ENSMUST00000226010 1898 ntBASIC17.85■□□□□ 0.45
Nfkb1P25799 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nfkb1P25799 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Nfkb1P25799 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nfkb1P25799 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nfkb1P25799 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nfkb1P25799 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nfkb1P25799 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Nfkb1P25799 Grk6-206ENSMUST00000224995 2971 ntBASIC17.85■□□□□ 0.45
Nfkb1P25799 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nfkb1P25799 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.85■□□□□ 0.45
Nfkb1P25799 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nfkb1P25799 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nfkb1P25799 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nfkb1P25799 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nfkb1P25799 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nfkb1P25799 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Nfkb1P25799 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nfkb1P25799 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nfkb1P25799 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nfkb1P25799 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Nfkb1P25799 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nfkb1P25799 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nfkb1P25799 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nfkb1P25799 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nfkb1P25799 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nfkb1P25799 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nfkb1P25799 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.84■□□□□ 0.45
Nfkb1P25799 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nfkb1P25799 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nfkb1P25799 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Nfkb1P25799 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Nfkb1P25799 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nfkb1P25799 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nfkb1P25799 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nfkb1P25799 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.83■□□□□ 0.45
Nfkb1P25799 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
Nfkb1P25799 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.83■□□□□ 0.44
Nfkb1P25799 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.83■□□□□ 0.44
Nfkb1P25799 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Nfkb1P25799 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Nfkb1P25799 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.83■□□□□ 0.44
Nfkb1P25799 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.82■□□□□ 0.44
Nfkb1P25799 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nfkb1P25799 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nfkb1P25799 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nfkb1P25799 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.82■□□□□ 0.44
Nfkb1P25799 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nfkb1P25799 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nfkb1P25799 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nfkb1P25799 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.82■□□□□ 0.44
Nfkb1P25799 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nfkb1P25799 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.82■□□□□ 0.44
Nfkb1P25799 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.82■□□□□ 0.44
Nfkb1P25799 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.82■□□□□ 0.44
Nfkb1P25799 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.82■□□□□ 0.44
Nfkb1P25799 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nfkb1P25799 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nfkb1P25799 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Nfkb1P25799 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.82■□□□□ 0.44
Nfkb1P25799 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nfkb1P25799 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nfkb1P25799 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nfkb1P25799 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Nfkb1P25799 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nfkb1P25799 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.82■□□□□ 0.44
Nfkb1P25799 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nfkb1P25799 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nfkb1P25799 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nfkb1P25799 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nfkb1P25799 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nfkb1P25799 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nfkb1P25799 Gm10013-201ENSMUST00000106074 672 ntBASIC17.81■□□□□ 0.44
Nfkb1P25799 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nfkb1P25799 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nfkb1P25799 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.81■□□□□ 0.44
Nfkb1P25799 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nfkb1P25799 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nfkb1P25799 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nfkb1P25799 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nfkb1P25799 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nfkb1P25799 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nfkb1P25799 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.81■□□□□ 0.44
Nfkb1P25799 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Nfkb1P25799 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nfkb1P25799 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Nfkb1P25799 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nfkb1P25799 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nfkb1P25799 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nfkb1P25799 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.8■□□□□ 0.44
Nfkb1P25799 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nfkb1P25799 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
Nfkb1P25799 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.8■□□□□ 0.44
Nfkb1P25799 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nfkb1P25799 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Nfkb1P25799 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nfkb1P25799 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nfkb1P25799 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nfkb1P25799 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms