Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Col8a2P25318 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col8a2P25318 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col8a2P25318 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col8a2P25318 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col8a2P25318 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col8a2P25318 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col8a2P25318 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col8a2P25318 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col8a2P25318 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col8a2P25318 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col8a2P25318 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col8a2P25318 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col8a2P25318 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Col8a2P25318 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col8a2P25318 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.51□□□□□ -0.09
Col8a2P25318 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col8a2P25318 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col8a2P25318 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col8a2P25318 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.5□□□□□ -0.09
Col8a2P25318 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.5□□□□□ -0.09
Col8a2P25318 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.5□□□□□ -0.09
Col8a2P25318 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col8a2P25318 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col8a2P25318 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col8a2P25318 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.5□□□□□ -0.09
Col8a2P25318 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col8a2P25318 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col8a2P25318 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col8a2P25318 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Col8a2P25318 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Col8a2P25318 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col8a2P25318 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col8a2P25318 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col8a2P25318 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col8a2P25318 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col8a2P25318 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col8a2P25318 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col8a2P25318 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Col8a2P25318 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Col8a2P25318 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Col8a2P25318 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Col8a2P25318 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col8a2P25318 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col8a2P25318 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col8a2P25318 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col8a2P25318 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Col8a2P25318 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col8a2P25318 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Col8a2P25318 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col8a2P25318 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col8a2P25318 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Col8a2P25318 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.48□□□□□ -0.09
Col8a2P25318 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.48□□□□□ -0.09
Col8a2P25318 Mir8112-201ENSMUST00000184382 131 ntBASIC14.48□□□□□ -0.09
Col8a2P25318 Gm7977-201ENSMUST00000193787 748 ntBASIC14.48□□□□□ -0.09
Col8a2P25318 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.48□□□□□ -0.09
Col8a2P25318 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col8a2P25318 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col8a2P25318 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.48□□□□□ -0.09
Col8a2P25318 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col8a2P25318 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Col8a2P25318 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col8a2P25318 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Col8a2P25318 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col8a2P25318 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col8a2P25318 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Col8a2P25318 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col8a2P25318 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Col8a2P25318 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col8a2P25318 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col8a2P25318 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col8a2P25318 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col8a2P25318 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.47□□□□□ -0.09
Col8a2P25318 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col8a2P25318 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.47□□□□□ -0.09
Col8a2P25318 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col8a2P25318 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col8a2P25318 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Col8a2P25318 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col8a2P25318 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col8a2P25318 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.47□□□□□ -0.09
Col8a2P25318 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.47□□□□□ -0.09
Col8a2P25318 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.47□□□□□ -0.09
Col8a2P25318 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.47□□□□□ -0.09
Col8a2P25318 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Col8a2P25318 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Col8a2P25318 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.47□□□□□ -0.09
Col8a2P25318 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col8a2P25318 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col8a2P25318 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col8a2P25318 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col8a2P25318 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col8a2P25318 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col8a2P25318 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col8a2P25318 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Col8a2P25318 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col8a2P25318 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.46□□□□□ -0.09
Col8a2P25318 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Col8a2P25318 Gm10418-201ENSMUST00000100943 576 ntBASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms