Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Aldh1a1P24549 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Aldh1a1P24549 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Aldh1a1P24549 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Aldh1a1P24549 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Aldh1a1P24549 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Aldh1a1P24549 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Aldh1a1P24549 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Aldh1a1P24549 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.6■□□□□ 0.57
Aldh1a1P24549 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.6■□□□□ 0.57
Aldh1a1P24549 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Aldh1a1P24549 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Aldh1a1P24549 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Aldh1a1P24549 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.59■□□□□ 0.57
Aldh1a1P24549 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Aldh1a1P24549 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Aldh1a1P24549 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Aldh1a1P24549 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.59■□□□□ 0.57
Aldh1a1P24549 Gm43347-201ENSMUST00000200226 580 ntBASIC18.59■□□□□ 0.57
Aldh1a1P24549 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Aldh1a1P24549 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Aldh1a1P24549 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Aldh1a1P24549 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Aldh1a1P24549 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.58■□□□□ 0.57
Aldh1a1P24549 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Aldh1a1P24549 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Aldh1a1P24549 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Aldh1a1P24549 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Aldh1a1P24549 Gm15794-201ENSMUST00000120182 631 ntBASIC18.58■□□□□ 0.56
Aldh1a1P24549 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Aldh1a1P24549 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.58■□□□□ 0.56
Aldh1a1P24549 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Aldh1a1P24549 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Aldh1a1P24549 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.58■□□□□ 0.56
Aldh1a1P24549 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
Aldh1a1P24549 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Aldh1a1P24549 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Aldh1a1P24549 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Aldh1a1P24549 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Aldh1a1P24549 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.58■□□□□ 0.56
Aldh1a1P24549 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Aldh1a1P24549 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Aldh1a1P24549 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Aldh1a1P24549 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.57■□□□□ 0.56
Aldh1a1P24549 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Aldh1a1P24549 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Aldh1a1P24549 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Aldh1a1P24549 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Aldh1a1P24549 Gm13884-201ENSMUST00000118103 829 ntBASIC18.57■□□□□ 0.56
Aldh1a1P24549 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.57■□□□□ 0.56
Aldh1a1P24549 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Aldh1a1P24549 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Aldh1a1P24549 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.57■□□□□ 0.56
Aldh1a1P24549 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Aldh1a1P24549 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.57■□□□□ 0.56
Aldh1a1P24549 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Aldh1a1P24549 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Aldh1a1P24549 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Aldh1a1P24549 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Aldh1a1P24549 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Aldh1a1P24549 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Aldh1a1P24549 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Aldh1a1P24549 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Aldh1a1P24549 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Aldh1a1P24549 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Aldh1a1P24549 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Aldh1a1P24549 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Aldh1a1P24549 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Aldh1a1P24549 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Aldh1a1P24549 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Aldh1a1P24549 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Aldh1a1P24549 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Aldh1a1P24549 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Aldh1a1P24549 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Aldh1a1P24549 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Aldh1a1P24549 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Aldh1a1P24549 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Aldh1a1P24549 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.55■□□□□ 0.56
Aldh1a1P24549 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Aldh1a1P24549 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Aldh1a1P24549 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Aldh1a1P24549 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Aldh1a1P24549 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.55■□□□□ 0.56
Aldh1a1P24549 Gm12895-201ENSMUST00000122214 226 ntBASIC18.55■□□□□ 0.56
Aldh1a1P24549 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Aldh1a1P24549 Gm18733-201ENSMUST00000173950 856 ntBASIC18.55■□□□□ 0.56
Aldh1a1P24549 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.55■□□□□ 0.56
Aldh1a1P24549 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Aldh1a1P24549 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.55■□□□□ 0.56
Aldh1a1P24549 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Aldh1a1P24549 Gm18195-201ENSMUST00000207604 706 ntBASIC18.55■□□□□ 0.56
Aldh1a1P24549 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Aldh1a1P24549 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.55■□□□□ 0.56
Aldh1a1P24549 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Aldh1a1P24549 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Aldh1a1P24549 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Aldh1a1P24549 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Aldh1a1P24549 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Aldh1a1P24549 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Aldh1a1P24549 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms