Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TP20293 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TP20293 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TP20293 Gm10418-201ENSMUST00000100943 576 ntBASIC16.32■□□□□ 0.2
TP20293 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.32■□□□□ 0.2
TP20293 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TP20293 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TP20293 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.32■□□□□ 0.2
TP20293 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.32■□□□□ 0.2
TP20293 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.32■□□□□ 0.2
TP20293 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.32■□□□□ 0.2
TP20293 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TP20293 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.32■□□□□ 0.2
TP20293 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TP20293 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TP20293 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.32■□□□□ 0.2
TP20293 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TP20293 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TP20293 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TP20293 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TP20293 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TP20293 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TP20293 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TP20293 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TP20293 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TP20293 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TP20293 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TP20293 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TP20293 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TP20293 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TP20293 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.31■□□□□ 0.2
TP20293 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TP20293 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TP20293 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TP20293 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TP20293 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TP20293 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TP20293 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TP20293 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.31■□□□□ 0.2
TP20293 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.31■□□□□ 0.2
TP20293 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TP20293 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TP20293 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TP20293 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TP20293 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TP20293 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.3■□□□□ 0.2
TP20293 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TP20293 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
TP20293 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TP20293 Gm11643-201ENSMUST00000119578 864 ntBASIC16.3■□□□□ 0.2
TP20293 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TP20293 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TP20293 Gm18025-201ENSMUST00000221733 862 ntBASIC16.3■□□□□ 0.2
TP20293 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
TP20293 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TP20293 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.3■□□□□ 0.2
TP20293 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TP20293 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TP20293 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TP20293 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TP20293 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TP20293 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TP20293 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TP20293 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TP20293 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TP20293 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TP20293 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.29■□□□□ 0.2
TP20293 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TP20293 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TP20293 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TP20293 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TP20293 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TP20293 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TP20293 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TP20293 Gm15378-201ENSMUST00000121894 207 ntBASIC16.29■□□□□ 0.2
TP20293 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TP20293 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TP20293 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.29■□□□□ 0.2
TP20293 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.29■□□□□ 0.2
TP20293 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TP20293 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TP20293 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TP20293 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TP20293 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.29■□□□□ 0.2
TP20293 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TP20293 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TP20293 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TP20293 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TP20293 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TP20293 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TP20293 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.28■□□□□ 0.2
TP20293 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TP20293 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TP20293 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TP20293 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TP20293 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.28■□□□□ 0.2
TP20293 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TP20293 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.28■□□□□ 0.2
TP20293 Gm10698-201ENSMUST00000182663 604 ntBASIC16.28■□□□□ 0.2
TP20293 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms