Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmga1P17095 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.77■□□□□ 0.44
Hmga1P17095 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmga1P17095 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Hmga1P17095 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.77■□□□□ 0.44
Hmga1P17095 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmga1P17095 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmga1P17095 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Hmga1P17095 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Hmga1P17095 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hmga1P17095 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.77■□□□□ 0.43
Hmga1P17095 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmga1P17095 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Hmga1P17095 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hmga1P17095 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmga1P17095 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hmga1P17095 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.76■□□□□ 0.43
Hmga1P17095 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.76■□□□□ 0.43
Hmga1P17095 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Hmga1P17095 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hmga1P17095 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Hmga1P17095 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.76■□□□□ 0.43
Hmga1P17095 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmga1P17095 Gm10566-201ENSMUST00000086739 996 ntBASIC17.76■□□□□ 0.43
Hmga1P17095 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.76■□□□□ 0.43
Hmga1P17095 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.76■□□□□ 0.43
Hmga1P17095 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmga1P17095 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmga1P17095 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmga1P17095 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Hmga1P17095 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmga1P17095 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Hmga1P17095 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmga1P17095 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Hmga1P17095 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmga1P17095 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.75■□□□□ 0.43
Hmga1P17095 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.75■□□□□ 0.43
Hmga1P17095 Gm27389-201ENSMUST00000183622 195 ntBASIC17.75■□□□□ 0.43
Hmga1P17095 Gm21362-201ENSMUST00000194272 928 ntBASIC17.75■□□□□ 0.43
Hmga1P17095 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmga1P17095 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmga1P17095 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmga1P17095 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmga1P17095 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmga1P17095 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmga1P17095 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Hmga1P17095 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmga1P17095 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmga1P17095 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmga1P17095 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmga1P17095 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmga1P17095 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.74■□□□□ 0.43
Hmga1P17095 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmga1P17095 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmga1P17095 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Hmga1P17095 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmga1P17095 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmga1P17095 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Hmga1P17095 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmga1P17095 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.74■□□□□ 0.43
Hmga1P17095 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmga1P17095 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmga1P17095 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmga1P17095 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmga1P17095 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmga1P17095 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmga1P17095 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.73■□□□□ 0.43
Hmga1P17095 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmga1P17095 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmga1P17095 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmga1P17095 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmga1P17095 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Hmga1P17095 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmga1P17095 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmga1P17095 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.73■□□□□ 0.43
Hmga1P17095 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hmga1P17095 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hmga1P17095 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmga1P17095 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmga1P17095 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hmga1P17095 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Hmga1P17095 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Hmga1P17095 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Hmga1P17095 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.73■□□□□ 0.43
Hmga1P17095 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmga1P17095 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmga1P17095 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hmga1P17095 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmga1P17095 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Hmga1P17095 Actl10-202ENSMUST00000226583 1501 ntBASIC17.72■□□□□ 0.43
Hmga1P17095 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Hmga1P17095 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmga1P17095 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hmga1P17095 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmga1P17095 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.72■□□□□ 0.43
Hmga1P17095 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmga1P17095 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.72■□□□□ 0.43
Hmga1P17095 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Hmga1P17095 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.72■□□□□ 0.43
Hmga1P17095 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms