Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msx1P13297 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msx1P13297 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msx1P13297 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msx1P13297 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Msx1P13297 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msx1P13297 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Msx1P13297 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msx1P13297 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msx1P13297 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Msx1P13297 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msx1P13297 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Msx1P13297 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.46■□□□□ 0.23
Msx1P13297 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.46■□□□□ 0.23
Msx1P13297 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Msx1P13297 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msx1P13297 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msx1P13297 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.46■□□□□ 0.23
Msx1P13297 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Msx1P13297 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Msx1P13297 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Msx1P13297 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.45■□□□□ 0.22
Msx1P13297 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Msx1P13297 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Msx1P13297 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Msx1P13297 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msx1P13297 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msx1P13297 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msx1P13297 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Msx1P13297 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Msx1P13297 Gm10013-201ENSMUST00000106074 672 ntBASIC16.45■□□□□ 0.22
Msx1P13297 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msx1P13297 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.45■□□□□ 0.22
Msx1P13297 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Msx1P13297 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msx1P13297 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msx1P13297 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msx1P13297 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Msx1P13297 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msx1P13297 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.45■□□□□ 0.22
Msx1P13297 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msx1P13297 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Msx1P13297 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Msx1P13297 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Msx1P13297 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Msx1P13297 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msx1P13297 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msx1P13297 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msx1P13297 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Msx1P13297 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Msx1P13297 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.44■□□□□ 0.22
Msx1P13297 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Msx1P13297 AA414768-201ENSMUST00000121924 1257 ntBASIC16.44■□□□□ 0.22
Msx1P13297 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msx1P13297 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.44■□□□□ 0.22
Msx1P13297 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msx1P13297 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msx1P13297 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msx1P13297 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msx1P13297 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msx1P13297 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msx1P13297 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Msx1P13297 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msx1P13297 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msx1P13297 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msx1P13297 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msx1P13297 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msx1P13297 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.43■□□□□ 0.22
Msx1P13297 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.43■□□□□ 0.22
Msx1P13297 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Msx1P13297 Mir6349-201ENSMUST00000184059 97 ntBASIC16.43■□□□□ 0.22
Msx1P13297 Gm33142-201ENSMUST00000193913 867 ntBASIC16.43■□□□□ 0.22
Msx1P13297 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msx1P13297 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.43■□□□□ 0.22
Msx1P13297 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msx1P13297 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Msx1P13297 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Msx1P13297 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msx1P13297 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msx1P13297 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msx1P13297 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.42■□□□□ 0.22
Msx1P13297 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msx1P13297 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.42■□□□□ 0.22
Msx1P13297 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msx1P13297 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msx1P13297 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msx1P13297 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msx1P13297 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Msx1P13297 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msx1P13297 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Msx1P13297 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msx1P13297 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Msx1P13297 Gm6345-202ENSMUST00000180900 204 ntBASIC16.42■□□□□ 0.22
Msx1P13297 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.42■□□□□ 0.22
Msx1P13297 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.42■□□□□ 0.22
Msx1P13297 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msx1P13297 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msx1P13297 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msx1P13297 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msx1P13297 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms