Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp6P0C0A3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.89■□□□□ 0.61
Chmp6P0C0A3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp6P0C0A3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp6P0C0A3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp6P0C0A3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp6P0C0A3 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.88■□□□□ 0.61
Chmp6P0C0A3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp6P0C0A3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.88■□□□□ 0.61
Chmp6P0C0A3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp6P0C0A3 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.88■□□□□ 0.61
Chmp6P0C0A3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp6P0C0A3 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.88■□□□□ 0.61
Chmp6P0C0A3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp6P0C0A3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.88■□□□□ 0.61
Chmp6P0C0A3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp6P0C0A3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp6P0C0A3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp6P0C0A3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp6P0C0A3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp6P0C0A3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.88■□□□□ 0.61
Chmp6P0C0A3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Chmp6P0C0A3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp6P0C0A3 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp6P0C0A3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp6P0C0A3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp6P0C0A3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp6P0C0A3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Chmp6P0C0A3 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Chmp6P0C0A3 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.87■□□□□ 0.61
Chmp6P0C0A3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.87■□□□□ 0.61
Chmp6P0C0A3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Chmp6P0C0A3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp6P0C0A3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp6P0C0A3 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Chmp6P0C0A3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp6P0C0A3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp6P0C0A3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp6P0C0A3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.87■□□□□ 0.61
Chmp6P0C0A3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp6P0C0A3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp6P0C0A3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp6P0C0A3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp6P0C0A3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Chmp6P0C0A3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp6P0C0A3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp6P0C0A3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp6P0C0A3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp6P0C0A3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Chmp6P0C0A3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp6P0C0A3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp6P0C0A3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Chmp6P0C0A3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Chmp6P0C0A3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp6P0C0A3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp6P0C0A3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.86■□□□□ 0.61
Chmp6P0C0A3 Gm37292-201ENSMUST00000192062 758 ntBASIC18.86■□□□□ 0.61
Chmp6P0C0A3 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.86■□□□□ 0.61
Chmp6P0C0A3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp6P0C0A3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp6P0C0A3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp6P0C0A3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp6P0C0A3 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp6P0C0A3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp6P0C0A3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp6P0C0A3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Chmp6P0C0A3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Chmp6P0C0A3 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.85■□□□□ 0.61
Chmp6P0C0A3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp6P0C0A3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.85■□□□□ 0.61
Chmp6P0C0A3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.85■□□□□ 0.61
Chmp6P0C0A3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.85■□□□□ 0.61
Chmp6P0C0A3 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp6P0C0A3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Chmp6P0C0A3 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.85■□□□□ 0.61
Chmp6P0C0A3 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp6P0C0A3 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.85■□□□□ 0.61
Chmp6P0C0A3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp6P0C0A3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Chmp6P0C0A3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp6P0C0A3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp6P0C0A3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp6P0C0A3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.85■□□□□ 0.61
Chmp6P0C0A3 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp6P0C0A3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp6P0C0A3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp6P0C0A3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp6P0C0A3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp6P0C0A3 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Chmp6P0C0A3 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp6P0C0A3 Mir1199-201ENSMUST00000117015 119 ntBASIC18.84■□□□□ 0.61
Chmp6P0C0A3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.84■□□□□ 0.61
Chmp6P0C0A3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.84■□□□□ 0.61
Chmp6P0C0A3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp6P0C0A3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp6P0C0A3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp6P0C0A3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp6P0C0A3 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp6P0C0A3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.84■□□□□ 0.61
Chmp6P0C0A3 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms