Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h2P0C090 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h2P0C090 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h2P0C090 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h2P0C090 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h2P0C090 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h2P0C090 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h2P0C090 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h2P0C090 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h2P0C090 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rc3h2P0C090 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rc3h2P0C090 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rc3h2P0C090 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.66■□□□□ 0.42
Rc3h2P0C090 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rc3h2P0C090 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rc3h2P0C090 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rc3h2P0C090 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.66■□□□□ 0.42
Rc3h2P0C090 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rc3h2P0C090 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rc3h2P0C090 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rc3h2P0C090 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rc3h2P0C090 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Rc3h2P0C090 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.66■□□□□ 0.42
Rc3h2P0C090 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rc3h2P0C090 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rc3h2P0C090 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rc3h2P0C090 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.66■□□□□ 0.42
Rc3h2P0C090 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rc3h2P0C090 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rc3h2P0C090 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rc3h2P0C090 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rc3h2P0C090 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rc3h2P0C090 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rc3h2P0C090 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.65■□□□□ 0.42
Rc3h2P0C090 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rc3h2P0C090 Gm6345-202ENSMUST00000180900 204 ntBASIC17.65■□□□□ 0.42
Rc3h2P0C090 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rc3h2P0C090 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rc3h2P0C090 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rc3h2P0C090 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rc3h2P0C090 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rc3h2P0C090 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rc3h2P0C090 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Rc3h2P0C090 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.42
Rc3h2P0C090 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rc3h2P0C090 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Rc3h2P0C090 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rc3h2P0C090 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.64■□□□□ 0.41
Rc3h2P0C090 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.64■□□□□ 0.41
Rc3h2P0C090 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rc3h2P0C090 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rc3h2P0C090 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Rc3h2P0C090 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Rc3h2P0C090 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.64■□□□□ 0.41
Rc3h2P0C090 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rc3h2P0C090 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.64■□□□□ 0.41
Rc3h2P0C090 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.64■□□□□ 0.41
Rc3h2P0C090 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rc3h2P0C090 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rc3h2P0C090 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.64■□□□□ 0.41
Rc3h2P0C090 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
Rc3h2P0C090 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rc3h2P0C090 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rc3h2P0C090 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rc3h2P0C090 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rc3h2P0C090 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rc3h2P0C090 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.63■□□□□ 0.41
Rc3h2P0C090 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rc3h2P0C090 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rc3h2P0C090 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.63■□□□□ 0.41
Rc3h2P0C090 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rc3h2P0C090 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rc3h2P0C090 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rc3h2P0C090 Gm17661-201ENSMUST00000170317 270 ntBASIC17.63■□□□□ 0.41
Rc3h2P0C090 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.63■□□□□ 0.41
Rc3h2P0C090 Gm7367-201ENSMUST00000057611 492 ntBASIC17.63■□□□□ 0.41
Rc3h2P0C090 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rc3h2P0C090 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rc3h2P0C090 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rc3h2P0C090 Rarb-207ENSMUST00000225921 2756 ntBASIC17.63■□□□□ 0.41
Rc3h2P0C090 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rc3h2P0C090 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rc3h2P0C090 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rc3h2P0C090 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rc3h2P0C090 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rc3h2P0C090 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rc3h2P0C090 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rc3h2P0C090 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rc3h2P0C090 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Rc3h2P0C090 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rc3h2P0C090 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rc3h2P0C090 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rc3h2P0C090 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rc3h2P0C090 Mir8112-201ENSMUST00000184382 131 ntBASIC17.62■□□□□ 0.41
Rc3h2P0C090 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rc3h2P0C090 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.62■□□□□ 0.41
Rc3h2P0C090 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rc3h2P0C090 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rc3h2P0C090 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rc3h2P0C090 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms