Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sod1P08228 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sod1P08228 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sod1P08228 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sod1P08228 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sod1P08228 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Sod1P08228 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sod1P08228 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sod1P08228 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Sod1P08228 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sod1P08228 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sod1P08228 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sod1P08228 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.36■□□□□ 0.21
Sod1P08228 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sod1P08228 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.36■□□□□ 0.21
Sod1P08228 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sod1P08228 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sod1P08228 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.36■□□□□ 0.21
Sod1P08228 Gm7153-201ENSMUST00000117092 455 ntBASIC16.36■□□□□ 0.21
Sod1P08228 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Sod1P08228 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.36■□□□□ 0.21
Sod1P08228 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.36■□□□□ 0.21
Sod1P08228 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.36■□□□□ 0.21
Sod1P08228 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sod1P08228 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.36■□□□□ 0.21
Sod1P08228 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sod1P08228 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.36■□□□□ 0.21
Sod1P08228 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.36■□□□□ 0.21
Sod1P08228 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sod1P08228 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sod1P08228 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sod1P08228 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sod1P08228 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sod1P08228 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sod1P08228 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sod1P08228 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sod1P08228 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sod1P08228 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sod1P08228 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Sod1P08228 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sod1P08228 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sod1P08228 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sod1P08228 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sod1P08228 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Sod1P08228 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sod1P08228 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sod1P08228 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sod1P08228 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sod1P08228 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sod1P08228 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.34■□□□□ 0.21
Sod1P08228 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.34■□□□□ 0.21
Sod1P08228 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sod1P08228 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sod1P08228 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sod1P08228 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sod1P08228 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sod1P08228 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sod1P08228 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sod1P08228 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sod1P08228 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sod1P08228 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.33■□□□□ 0.21
Sod1P08228 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Sod1P08228 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sod1P08228 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sod1P08228 Olfr129-201ENSMUST00000122318 993 ntBASIC16.33■□□□□ 0.2
Sod1P08228 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sod1P08228 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sod1P08228 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sod1P08228 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sod1P08228 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sod1P08228 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sod1P08228 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Sod1P08228 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sod1P08228 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Sod1P08228 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.32■□□□□ 0.2
Sod1P08228 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sod1P08228 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.32■□□□□ 0.2
Sod1P08228 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.32■□□□□ 0.2
Sod1P08228 Gm27000-201ENSMUST00000182943 842 ntBASIC16.32■□□□□ 0.2
Sod1P08228 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.32■□□□□ 0.2
Sod1P08228 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.32■□□□□ 0.2
Sod1P08228 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sod1P08228 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sod1P08228 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sod1P08228 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sod1P08228 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sod1P08228 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sod1P08228 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sod1P08228 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Sod1P08228 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Sod1P08228 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sod1P08228 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sod1P08228 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.31■□□□□ 0.2
Sod1P08228 Gm7461-201ENSMUST00000058918 827 ntBASIC16.31■□□□□ 0.2
Sod1P08228 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sod1P08228 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sod1P08228 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sod1P08228 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sod1P08228 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sod1P08228 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms