Protein–RNA interactions for Protein: P06332

Cd4, T-cell surface glycoprotein CD4, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd4P06332 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd4P06332 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd4P06332 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd4P06332 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd4P06332 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd4P06332 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd4P06332 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd4P06332 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cd4P06332 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd4P06332 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.32■□□□□ 0.36
Cd4P06332 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cd4P06332 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd4P06332 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd4P06332 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd4P06332 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd4P06332 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd4P06332 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cd4P06332 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd4P06332 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd4P06332 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.31■□□□□ 0.36
Cd4P06332 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd4P06332 Gm12382-201ENSMUST00000122005 922 ntBASIC17.31■□□□□ 0.36
Cd4P06332 Gm10653-202ENSMUST00000139570 835 ntBASIC17.31■□□□□ 0.36
Cd4P06332 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.31■□□□□ 0.36
Cd4P06332 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.31■□□□□ 0.36
Cd4P06332 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd4P06332 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cd4P06332 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd4P06332 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.31■□□□□ 0.36
Cd4P06332 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Cd4P06332 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cd4P06332 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.3■□□□□ 0.36
Cd4P06332 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd4P06332 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd4P06332 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cd4P06332 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd4P06332 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd4P06332 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd4P06332 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.3■□□□□ 0.36
Cd4P06332 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cd4P06332 Gm43183-201ENSMUST00000200632 547 ntBASIC17.3■□□□□ 0.36
Cd4P06332 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd4P06332 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd4P06332 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd4P06332 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd4P06332 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd4P06332 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Cd4P06332 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd4P06332 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd4P06332 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd4P06332 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cd4P06332 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cd4P06332 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cd4P06332 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd4P06332 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.29■□□□□ 0.36
Cd4P06332 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cd4P06332 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd4P06332 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.29■□□□□ 0.36
Cd4P06332 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd4P06332 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.29■□□□□ 0.36
Cd4P06332 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cd4P06332 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd4P06332 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd4P06332 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd4P06332 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cd4P06332 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cd4P06332 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cd4P06332 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd4P06332 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd4P06332 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.28■□□□□ 0.36
Cd4P06332 Gm15378-201ENSMUST00000121894 207 ntBASIC17.28■□□□□ 0.36
Cd4P06332 Gm20760-201ENSMUST00000179197 648 ntBASIC17.28■□□□□ 0.36
Cd4P06332 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Cd4P06332 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd4P06332 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd4P06332 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cd4P06332 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd4P06332 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd4P06332 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd4P06332 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd4P06332 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.28■□□□□ 0.36
Cd4P06332 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cd4P06332 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Cd4P06332 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.27■□□□□ 0.36
Cd4P06332 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd4P06332 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd4P06332 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.27■□□□□ 0.36
Cd4P06332 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.27■□□□□ 0.36
Cd4P06332 Gm4974-201ENSMUST00000209974 875 ntBASIC17.27■□□□□ 0.36
Cd4P06332 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd4P06332 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Cd4P06332 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cd4P06332 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.27■□□□□ 0.35
Cd4P06332 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cd4P06332 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cd4P06332 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd4P06332 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd4P06332 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd4P06332 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cd4P06332 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms