Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PdgfrbP05622 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PdgfrbP05622 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PdgfrbP05622 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
PdgfrbP05622 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PdgfrbP05622 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PdgfrbP05622 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PdgfrbP05622 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.54■□□□□ 0.4
PdgfrbP05622 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
PdgfrbP05622 Gm44487-201ENSMUST00000205145 325 ntBASIC17.54■□□□□ 0.4
PdgfrbP05622 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PdgfrbP05622 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PdgfrbP05622 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PdgfrbP05622 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.53■□□□□ 0.4
PdgfrbP05622 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PdgfrbP05622 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PdgfrbP05622 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PdgfrbP05622 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.53■□□□□ 0.4
PdgfrbP05622 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.53■□□□□ 0.4
PdgfrbP05622 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PdgfrbP05622 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PdgfrbP05622 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PdgfrbP05622 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PdgfrbP05622 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PdgfrbP05622 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PdgfrbP05622 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PdgfrbP05622 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PdgfrbP05622 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PdgfrbP05622 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PdgfrbP05622 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.53■□□□□ 0.4
PdgfrbP05622 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PdgfrbP05622 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.52■□□□□ 0.4
PdgfrbP05622 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PdgfrbP05622 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PdgfrbP05622 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PdgfrbP05622 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
PdgfrbP05622 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.52■□□□□ 0.4
PdgfrbP05622 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
PdgfrbP05622 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
PdgfrbP05622 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PdgfrbP05622 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.52■□□□□ 0.4
PdgfrbP05622 Gm4974-201ENSMUST00000209974 875 ntBASIC17.52■□□□□ 0.4
PdgfrbP05622 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PdgfrbP05622 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PdgfrbP05622 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PdgfrbP05622 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PdgfrbP05622 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PdgfrbP05622 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PdgfrbP05622 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PdgfrbP05622 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PdgfrbP05622 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.52■□□□□ 0.39
PdgfrbP05622 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PdgfrbP05622 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PdgfrbP05622 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PdgfrbP05622 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PdgfrbP05622 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PdgfrbP05622 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PdgfrbP05622 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PdgfrbP05622 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PdgfrbP05622 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PdgfrbP05622 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PdgfrbP05622 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PdgfrbP05622 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.51■□□□□ 0.39
PdgfrbP05622 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PdgfrbP05622 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PdgfrbP05622 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.51■□□□□ 0.39
PdgfrbP05622 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PdgfrbP05622 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PdgfrbP05622 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PdgfrbP05622 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PdgfrbP05622 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PdgfrbP05622 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PdgfrbP05622 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PdgfrbP05622 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PdgfrbP05622 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PdgfrbP05622 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PdgfrbP05622 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PdgfrbP05622 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PdgfrbP05622 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PdgfrbP05622 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PdgfrbP05622 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PdgfrbP05622 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PdgfrbP05622 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PdgfrbP05622 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PdgfrbP05622 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.5■□□□□ 0.39
PdgfrbP05622 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PdgfrbP05622 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PdgfrbP05622 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PdgfrbP05622 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PdgfrbP05622 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PdgfrbP05622 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PdgfrbP05622 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.49■□□□□ 0.39
PdgfrbP05622 Gm22240-201ENSMUST00000175225 82 ntBASIC17.49■□□□□ 0.39
PdgfrbP05622 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PdgfrbP05622 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PdgfrbP05622 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PdgfrbP05622 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PdgfrbP05622 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PdgfrbP05622 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PdgfrbP05622 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms