Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cops6O88545 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cops6O88545 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cops6O88545 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cops6O88545 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cops6O88545 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cops6O88545 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cops6O88545 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Cops6O88545 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.23■□□□□ 0.99
Cops6O88545 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cops6O88545 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cops6O88545 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Cops6O88545 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cops6O88545 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cops6O88545 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cops6O88545 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cops6O88545 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
Cops6O88545 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.22■□□□□ 0.99
Cops6O88545 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Cops6O88545 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cops6O88545 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cops6O88545 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cops6O88545 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Cops6O88545 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cops6O88545 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cops6O88545 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cops6O88545 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cops6O88545 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cops6O88545 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC21.21■□□□□ 0.99
Cops6O88545 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cops6O88545 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Cops6O88545 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cops6O88545 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC21.21■□□□□ 0.99
Cops6O88545 Gm17808-201ENSMUST00000200859 894 ntBASIC21.21■□□□□ 0.99
Cops6O88545 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Cops6O88545 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Cops6O88545 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cops6O88545 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cops6O88545 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.21■□□□□ 0.99
Cops6O88545 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Cops6O88545 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
Cops6O88545 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Cops6O88545 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Cops6O88545 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.2■□□□□ 0.98
Cops6O88545 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Cops6O88545 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cops6O88545 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cops6O88545 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cops6O88545 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC21.2■□□□□ 0.98
Cops6O88545 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cops6O88545 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Cops6O88545 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Cops6O88545 AC154855.1-201ENSMUST00000227353 1458 ntBASIC21.2■□□□□ 0.98
Cops6O88545 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC21.19■□□□□ 0.98
Cops6O88545 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cops6O88545 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC21.19■□□□□ 0.98
Cops6O88545 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cops6O88545 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Cops6O88545 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cops6O88545 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cops6O88545 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Cops6O88545 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC21.19■□□□□ 0.98
Cops6O88545 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Cops6O88545 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC21.19■□□□□ 0.98
Cops6O88545 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cops6O88545 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cops6O88545 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cops6O88545 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.19■□□□□ 0.98
Cops6O88545 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Cops6O88545 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cops6O88545 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cops6O88545 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cops6O88545 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cops6O88545 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC21.19■□□□□ 0.98
Cops6O88545 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cops6O88545 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cops6O88545 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cops6O88545 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Cops6O88545 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC21.18■□□□□ 0.98
Cops6O88545 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cops6O88545 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cops6O88545 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cops6O88545 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cops6O88545 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cops6O88545 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.17■□□□□ 0.98
Cops6O88545 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cops6O88545 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cops6O88545 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cops6O88545 Gm18958-201ENSMUST00000174258 762 ntBASIC21.17■□□□□ 0.98
Cops6O88545 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cops6O88545 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cops6O88545 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cops6O88545 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cops6O88545 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cops6O88545 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cops6O88545 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cops6O88545 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cops6O88545 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cops6O88545 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Cops6O88545 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms