Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf17O88472 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf17O88472 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf17O88472 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf17O88472 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf17O88472 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf17O88472 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Tnfrsf17O88472 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.1■□□□□ 0.17
Tnfrsf17O88472 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf17O88472 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf17O88472 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf17O88472 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf17O88472 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf17O88472 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf17O88472 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf17O88472 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf17O88472 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Tnfrsf17O88472 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Tnfrsf17O88472 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Tnfrsf17O88472 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.1■□□□□ 0.17
Tnfrsf17O88472 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf17O88472 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Tnfrsf17O88472 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Tnfrsf17O88472 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Tnfrsf17O88472 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf17O88472 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf17O88472 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Tnfrsf17O88472 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf17O88472 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf17O88472 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf17O88472 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf17O88472 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf17O88472 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Tnfrsf17O88472 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.09■□□□□ 0.17
Tnfrsf17O88472 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf17O88472 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf17O88472 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf17O88472 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf17O88472 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Tnfrsf17O88472 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf17O88472 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tnfrsf17O88472 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tnfrsf17O88472 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tnfrsf17O88472 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
Tnfrsf17O88472 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf17O88472 Gm15372-201ENSMUST00000120729 834 ntBASIC16.08■□□□□ 0.16
Tnfrsf17O88472 Gm6736-201ENSMUST00000166583 948 ntBASIC16.08■□□□□ 0.16
Tnfrsf17O88472 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
Tnfrsf17O88472 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf17O88472 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf17O88472 Gm43575-201ENSMUST00000196420 516 ntBASIC16.08■□□□□ 0.16
Tnfrsf17O88472 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf17O88472 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf17O88472 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf17O88472 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Tnfrsf17O88472 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf17O88472 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf17O88472 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf17O88472 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf17O88472 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf17O88472 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf17O88472 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf17O88472 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf17O88472 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf17O88472 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf17O88472 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf17O88472 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf17O88472 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf17O88472 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf17O88472 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf17O88472 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.07■□□□□ 0.16
Tnfrsf17O88472 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.07■□□□□ 0.16
Tnfrsf17O88472 Mir5131-201ENSMUST00000175426 93 ntBASIC16.07■□□□□ 0.16
Tnfrsf17O88472 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.07■□□□□ 0.16
Tnfrsf17O88472 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.07■□□□□ 0.16
Tnfrsf17O88472 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.07■□□□□ 0.16
Tnfrsf17O88472 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.07■□□□□ 0.16
Tnfrsf17O88472 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Tnfrsf17O88472 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf17O88472 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Tnfrsf17O88472 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.07■□□□□ 0.16
Tnfrsf17O88472 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.07■□□□□ 0.16
Tnfrsf17O88472 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf17O88472 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf17O88472 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf17O88472 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf17O88472 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf17O88472 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf17O88472 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Tnfrsf17O88472 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf17O88472 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf17O88472 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf17O88472 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf17O88472 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.06■□□□□ 0.16
Tnfrsf17O88472 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.06■□□□□ 0.16
Tnfrsf17O88472 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf17O88472 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.06■□□□□ 0.16
Tnfrsf17O88472 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.06■□□□□ 0.16
Tnfrsf17O88472 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
Tnfrsf17O88472 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms