Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc4a4O88343 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc4a4O88343 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc4a4O88343 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc4a4O88343 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc4a4O88343 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc4a4O88343 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slc4a4O88343 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slc4a4O88343 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.51■□□□□ 0.87
Slc4a4O88343 Gm10231-201ENSMUST00000181584 441 ntBASIC20.51■□□□□ 0.87
Slc4a4O88343 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc4a4O88343 Gm10175-202ENSMUST00000208752 441 ntBASIC20.51■□□□□ 0.87
Slc4a4O88343 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc4a4O88343 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc4a4O88343 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc4a4O88343 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc4a4O88343 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc4a4O88343 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.51■□□□□ 0.87
Slc4a4O88343 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc4a4O88343 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc4a4O88343 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.51■□□□□ 0.87
Slc4a4O88343 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc4a4O88343 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc4a4O88343 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slc4a4O88343 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc4a4O88343 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slc4a4O88343 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc4a4O88343 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Slc4a4O88343 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc4a4O88343 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.5■□□□□ 0.87
Slc4a4O88343 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Slc4a4O88343 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Slc4a4O88343 Gm9731-201ENSMUST00000209480 747 ntBASIC20.5■□□□□ 0.87
Slc4a4O88343 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.5■□□□□ 0.87
Slc4a4O88343 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.5■□□□□ 0.87
Slc4a4O88343 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc4a4O88343 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Slc4a4O88343 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.5■□□□□ 0.87
Slc4a4O88343 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Slc4a4O88343 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Slc4a4O88343 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc4a4O88343 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc4a4O88343 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc4a4O88343 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Slc4a4O88343 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc4a4O88343 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc4a4O88343 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc4a4O88343 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc4a4O88343 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc4a4O88343 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc4a4O88343 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Slc4a4O88343 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc4a4O88343 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc4a4O88343 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Slc4a4O88343 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc4a4O88343 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Slc4a4O88343 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc4a4O88343 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Slc4a4O88343 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Slc4a4O88343 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc4a4O88343 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Slc4a4O88343 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Slc4a4O88343 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Slc4a4O88343 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.48■□□□□ 0.87
Slc4a4O88343 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Slc4a4O88343 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.48■□□□□ 0.87
Slc4a4O88343 Gm2274-201ENSMUST00000184539 609 ntBASIC20.48■□□□□ 0.87
Slc4a4O88343 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.48■□□□□ 0.87
Slc4a4O88343 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Slc4a4O88343 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc4a4O88343 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc4a4O88343 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc4a4O88343 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc4a4O88343 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Slc4a4O88343 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.48■□□□□ 0.87
Slc4a4O88343 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc4a4O88343 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.47■□□□□ 0.87
Slc4a4O88343 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Slc4a4O88343 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Slc4a4O88343 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Slc4a4O88343 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Slc4a4O88343 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc4a4O88343 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Slc4a4O88343 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.47■□□□□ 0.87
Slc4a4O88343 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc4a4O88343 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Slc4a4O88343 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.47■□□□□ 0.87
Slc4a4O88343 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Slc4a4O88343 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc4a4O88343 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc4a4O88343 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc4a4O88343 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc4a4O88343 Gm18959-201ENSMUST00000208954 655 ntBASIC20.46■□□□□ 0.87
Slc4a4O88343 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.46■□□□□ 0.87
Slc4a4O88343 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc4a4O88343 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc4a4O88343 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.46■□□□□ 0.87
Slc4a4O88343 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc4a4O88343 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc4a4O88343 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms