Protein–RNA interactions for Protein: O70361

Per3, Period circadian protein homolog 3, mousemouse

Predictions only

Length 1,113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per3O70361 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Per3O70361 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Per3O70361 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Per3O70361 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Per3O70361 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Per3O70361 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Per3O70361 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Per3O70361 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Per3O70361 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Per3O70361 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.76■□□□□ 0.43
Per3O70361 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Per3O70361 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Per3O70361 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Per3O70361 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Per3O70361 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Per3O70361 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Per3O70361 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Per3O70361 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Per3O70361 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.76■□□□□ 0.43
Per3O70361 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Per3O70361 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Per3O70361 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Per3O70361 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Per3O70361 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Per3O70361 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Per3O70361 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Per3O70361 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Per3O70361 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Per3O70361 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Per3O70361 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Per3O70361 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Per3O70361 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Per3O70361 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Per3O70361 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Per3O70361 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Per3O70361 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Per3O70361 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Per3O70361 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.75■□□□□ 0.43
Per3O70361 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.75■□□□□ 0.43
Per3O70361 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Per3O70361 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Per3O70361 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Per3O70361 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Per3O70361 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.75■□□□□ 0.43
Per3O70361 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Per3O70361 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Per3O70361 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.75■□□□□ 0.43
Per3O70361 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Per3O70361 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Per3O70361 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Per3O70361 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Per3O70361 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Per3O70361 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Per3O70361 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Per3O70361 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Per3O70361 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Per3O70361 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Per3O70361 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Per3O70361 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.74■□□□□ 0.43
Per3O70361 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Per3O70361 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Per3O70361 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Per3O70361 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Per3O70361 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Per3O70361 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.74■□□□□ 0.43
Per3O70361 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.74■□□□□ 0.43
Per3O70361 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Per3O70361 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Per3O70361 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Per3O70361 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Per3O70361 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Per3O70361 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Per3O70361 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Per3O70361 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.73■□□□□ 0.43
Per3O70361 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Per3O70361 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Per3O70361 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.73■□□□□ 0.43
Per3O70361 Gm8969-201ENSMUST00000199694 526 ntBASIC17.73■□□□□ 0.43
Per3O70361 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.73■□□□□ 0.43
Per3O70361 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Per3O70361 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Per3O70361 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Per3O70361 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Per3O70361 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.73■□□□□ 0.43
Per3O70361 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
Per3O70361 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Per3O70361 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Per3O70361 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.73■□□□□ 0.43
Per3O70361 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Per3O70361 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Per3O70361 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Per3O70361 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Per3O70361 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Per3O70361 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Per3O70361 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Per3O70361 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Per3O70361 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Per3O70361 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Per3O70361 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Per3O70361 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms