Protein–RNA interactions for Protein: O70309

Itgb5, Integrin beta-5, mousemouse

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb5O70309 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.27■□□□□ 0.68
Itgb5O70309 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Itgb5O70309 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.27■□□□□ 0.68
Itgb5O70309 Gm7213-201ENSMUST00000215977 950 ntBASIC19.27■□□□□ 0.68
Itgb5O70309 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
Itgb5O70309 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Itgb5O70309 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Itgb5O70309 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Itgb5O70309 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.27■□□□□ 0.67
Itgb5O70309 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Itgb5O70309 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Itgb5O70309 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Itgb5O70309 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Itgb5O70309 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Itgb5O70309 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.26■□□□□ 0.67
Itgb5O70309 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.26■□□□□ 0.67
Itgb5O70309 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.26■□□□□ 0.67
Itgb5O70309 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Itgb5O70309 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Itgb5O70309 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Itgb5O70309 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Itgb5O70309 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Itgb5O70309 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.26■□□□□ 0.67
Itgb5O70309 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Itgb5O70309 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Itgb5O70309 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Itgb5O70309 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Itgb5O70309 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Itgb5O70309 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Itgb5O70309 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Itgb5O70309 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Itgb5O70309 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Itgb5O70309 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.25■□□□□ 0.67
Itgb5O70309 AA414768-201ENSMUST00000121924 1257 ntBASIC19.25■□□□□ 0.67
Itgb5O70309 Gm6345-202ENSMUST00000180900 204 ntBASIC19.25■□□□□ 0.67
Itgb5O70309 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.25■□□□□ 0.67
Itgb5O70309 Gm21559-201ENSMUST00000220638 855 ntBASIC19.25■□□□□ 0.67
Itgb5O70309 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Itgb5O70309 Gm8587-201ENSMUST00000076538 843 ntBASIC19.25■□□□□ 0.67
Itgb5O70309 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Itgb5O70309 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Itgb5O70309 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Itgb5O70309 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Itgb5O70309 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Itgb5O70309 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Itgb5O70309 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Itgb5O70309 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Itgb5O70309 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Itgb5O70309 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Itgb5O70309 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Itgb5O70309 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.24■□□□□ 0.67
Itgb5O70309 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Itgb5O70309 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Itgb5O70309 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Itgb5O70309 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Itgb5O70309 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Itgb5O70309 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.24■□□□□ 0.67
Itgb5O70309 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Itgb5O70309 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Itgb5O70309 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Itgb5O70309 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Itgb5O70309 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.24■□□□□ 0.67
Itgb5O70309 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Itgb5O70309 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.23■□□□□ 0.67
Itgb5O70309 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Itgb5O70309 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Itgb5O70309 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
Itgb5O70309 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Itgb5O70309 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Itgb5O70309 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Itgb5O70309 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.23■□□□□ 0.67
Itgb5O70309 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.23■□□□□ 0.67
Itgb5O70309 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Itgb5O70309 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Itgb5O70309 Gm10566-201ENSMUST00000086739 996 ntBASIC19.23■□□□□ 0.67
Itgb5O70309 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Itgb5O70309 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Itgb5O70309 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Itgb5O70309 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Itgb5O70309 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Itgb5O70309 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Itgb5O70309 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.22■□□□□ 0.67
Itgb5O70309 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Itgb5O70309 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Itgb5O70309 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Itgb5O70309 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Itgb5O70309 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.22■□□□□ 0.67
Itgb5O70309 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Itgb5O70309 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Itgb5O70309 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Itgb5O70309 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Itgb5O70309 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Itgb5O70309 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Itgb5O70309 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.22■□□□□ 0.67
Itgb5O70309 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.21■□□□□ 0.67
Itgb5O70309 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Itgb5O70309 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Itgb5O70309 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Itgb5O70309 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Itgb5O70309 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms