Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
Prom1O54990 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prom1O54990 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prom1O54990 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prom1O54990 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prom1O54990 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prom1O54990 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prom1O54990 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.17■□□□□ 0.66
Prom1O54990 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prom1O54990 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Prom1O54990 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prom1O54990 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Prom1O54990 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prom1O54990 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prom1O54990 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.16■□□□□ 0.66
Prom1O54990 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prom1O54990 Mir770-201ENSMUST00000103252 94 ntBASIC19.16■□□□□ 0.66
Prom1O54990 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prom1O54990 Gm11950-201ENSMUST00000121615 838 ntBASIC19.16■□□□□ 0.66
Prom1O54990 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prom1O54990 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.16■□□□□ 0.66
Prom1O54990 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Prom1O54990 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.16■□□□□ 0.66
Prom1O54990 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prom1O54990 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prom1O54990 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prom1O54990 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prom1O54990 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prom1O54990 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Prom1O54990 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Prom1O54990 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prom1O54990 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prom1O54990 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.15■□□□□ 0.66
Prom1O54990 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prom1O54990 Mir8112-201ENSMUST00000184382 131 ntBASIC19.15■□□□□ 0.66
Prom1O54990 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prom1O54990 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prom1O54990 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prom1O54990 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prom1O54990 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prom1O54990 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Prom1O54990 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prom1O54990 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Prom1O54990 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prom1O54990 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Prom1O54990 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Prom1O54990 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Prom1O54990 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prom1O54990 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prom1O54990 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Prom1O54990 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prom1O54990 Gm18958-201ENSMUST00000174258 762 ntBASIC19.14■□□□□ 0.65
Prom1O54990 Gm37722-201ENSMUST00000193757 208 ntBASIC19.14■□□□□ 0.65
Prom1O54990 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prom1O54990 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prom1O54990 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prom1O54990 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prom1O54990 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prom1O54990 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prom1O54990 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prom1O54990 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prom1O54990 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.13■□□□□ 0.65
Prom1O54990 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19.13■□□□□ 0.65
Prom1O54990 Gm6623-201ENSMUST00000173570 544 ntBASIC19.13■□□□□ 0.65
Prom1O54990 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.13■□□□□ 0.65
Prom1O54990 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prom1O54990 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.13■□□□□ 0.65
Prom1O54990 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Prom1O54990 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Prom1O54990 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prom1O54990 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.12■□□□□ 0.65
Prom1O54990 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.12■□□□□ 0.65
Prom1O54990 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prom1O54990 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prom1O54990 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Prom1O54990 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Prom1O54990 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Prom1O54990 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prom1O54990 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.12■□□□□ 0.65
Prom1O54990 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prom1O54990 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Prom1O54990 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Prom1O54990 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prom1O54990 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prom1O54990 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prom1O54990 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prom1O54990 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Prom1O54990 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prom1O54990 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Prom1O54990 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Prom1O54990 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prom1O54990 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prom1O54990 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Prom1O54990 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prom1O54990 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prom1O54990 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Prom1O54990 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Prom1O54990 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.11■□□□□ 0.65
Prom1O54990 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Prom1O54990 Gm18669-201ENSMUST00000216049 778 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms