Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Dkk1O54908 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Dkk1O54908 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Dkk1O54908 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC15.19■□□□□ 0.02
Dkk1O54908 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Dkk1O54908 Ighv10-4-201ENSMUST00000193702 299 ntBASIC15.19■□□□□ 0.02
Dkk1O54908 Gm44251-201ENSMUST00000204963 442 ntBASIC15.19■□□□□ 0.02
Dkk1O54908 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.19■□□□□ 0.02
Dkk1O54908 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Dkk1O54908 AC153529.1-201ENSMUST00000217818 370 ntBASIC15.19■□□□□ 0.02
Dkk1O54908 Zmym2-202ENSMUST00000223669 1281 ntBASIC15.19■□□□□ 0.02
Dkk1O54908 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.19■□□□□ 0.02
Dkk1O54908 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Dkk1O54908 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Dkk1O54908 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Dkk1O54908 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Dkk1O54908 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Dkk1O54908 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Dkk1O54908 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Dkk1O54908 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dkk1O54908 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dkk1O54908 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Dkk1O54908 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dkk1O54908 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dkk1O54908 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Dkk1O54908 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
Dkk1O54908 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dkk1O54908 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dkk1O54908 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
Dkk1O54908 Gm13401-201ENSMUST00000117074 291 ntBASIC15.18■□□□□ 0.02
Dkk1O54908 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC15.18■□□□□ 0.02
Dkk1O54908 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Dkk1O54908 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Dkk1O54908 Gm22240-201ENSMUST00000175225 82 ntBASIC15.18■□□□□ 0.02
Dkk1O54908 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Dkk1O54908 Gm7977-201ENSMUST00000193787 748 ntBASIC15.18■□□□□ 0.02
Dkk1O54908 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.18■□□□□ 0.02
Dkk1O54908 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Dkk1O54908 Gm45925-201ENSMUST00000218882 744 ntBASIC15.18■□□□□ 0.02
Dkk1O54908 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC15.18■□□□□ 0.02
Dkk1O54908 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dkk1O54908 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Dkk1O54908 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Dkk1O54908 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.18■□□□□ 0.02
Dkk1O54908 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dkk1O54908 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dkk1O54908 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.18■□□□□ 0.02
Dkk1O54908 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dkk1O54908 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.18■□□□□ 0.02
Dkk1O54908 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dkk1O54908 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dkk1O54908 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Dkk1O54908 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Dkk1O54908 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Dkk1O54908 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Dkk1O54908 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Dkk1O54908 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Dkk1O54908 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Dkk1O54908 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Dkk1O54908 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
Dkk1O54908 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Dkk1O54908 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Dkk1O54908 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Dkk1O54908 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Dkk1O54908 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC15.17■□□□□ 0.02
Dkk1O54908 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC15.17■□□□□ 0.02
Dkk1O54908 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC15.17■□□□□ 0.02
Dkk1O54908 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Dkk1O54908 Gm38319-201ENSMUST00000194537 1266 ntBASIC15.17■□□□□ 0.02
Dkk1O54908 Gm43316-201ENSMUST00000197252 1295 ntBASIC15.17■□□□□ 0.02
Dkk1O54908 Gm43811-201ENSMUST00000202862 695 ntBASIC15.17■□□□□ 0.02
Dkk1O54908 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.17■□□□□ 0.02
Dkk1O54908 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.17■□□□□ 0.02
Dkk1O54908 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Dkk1O54908 Prl7a1-203ENSMUST00000224852 1283 ntBASIC15.17■□□□□ 0.02
Dkk1O54908 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Dkk1O54908 Tprkb-202ENSMUST00000089570 1216 ntTSL 5 BASIC15.17■□□□□ 0.02
Dkk1O54908 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Dkk1O54908 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Dkk1O54908 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Dkk1O54908 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Dkk1O54908 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Dkk1O54908 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Dkk1O54908 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Dkk1O54908 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Dkk1O54908 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Dkk1O54908 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.16■□□□□ 0.02
Dkk1O54908 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Dkk1O54908 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Dkk1O54908 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Dkk1O54908 Tceal9-202ENSMUST00000113115 888 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Dkk1O54908 Gm11858-201ENSMUST00000117935 838 ntBASIC15.16■□□□□ 0.02
Dkk1O54908 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Dkk1O54908 Gm25109-201ENSMUST00000122474 114 ntBASIC15.16■□□□□ 0.02
Dkk1O54908 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Dkk1O54908 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Dkk1O54908 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Dkk1O54908 Gm17790-201ENSMUST00000191545 1228 ntBASIC15.16■□□□□ 0.02
Dkk1O54908 Gm36982-201ENSMUST00000193796 1128 ntBASIC15.16■□□□□ 0.02
Dkk1O54908 Gm43183-201ENSMUST00000200632 547 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms