Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc1a6O35544 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc1a6O35544 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc1a6O35544 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc1a6O35544 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc1a6O35544 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Slc1a6O35544 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Slc1a6O35544 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc1a6O35544 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Slc1a6O35544 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc1a6O35544 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.12■□□□□ 0.33
Slc1a6O35544 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Slc1a6O35544 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc1a6O35544 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.12■□□□□ 0.33
Slc1a6O35544 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc1a6O35544 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc1a6O35544 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Slc1a6O35544 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc1a6O35544 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc1a6O35544 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.11■□□□□ 0.33
Slc1a6O35544 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
Slc1a6O35544 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc1a6O35544 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc1a6O35544 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc1a6O35544 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slc1a6O35544 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc1a6O35544 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc1a6O35544 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Slc1a6O35544 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Slc1a6O35544 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Slc1a6O35544 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc1a6O35544 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.11■□□□□ 0.33
Slc1a6O35544 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc1a6O35544 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc1a6O35544 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc1a6O35544 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc1a6O35544 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc1a6O35544 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.1■□□□□ 0.33
Slc1a6O35544 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Slc1a6O35544 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc1a6O35544 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Slc1a6O35544 Mir2861-201ENSMUST00000175539 82 ntBASIC17.1■□□□□ 0.33
Slc1a6O35544 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.1■□□□□ 0.33
Slc1a6O35544 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc1a6O35544 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.1■□□□□ 0.33
Slc1a6O35544 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc1a6O35544 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc1a6O35544 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc1a6O35544 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc1a6O35544 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc1a6O35544 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Slc1a6O35544 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc1a6O35544 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc1a6O35544 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc1a6O35544 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Slc1a6O35544 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc1a6O35544 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc1a6O35544 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Slc1a6O35544 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc1a6O35544 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.09■□□□□ 0.33
Slc1a6O35544 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Slc1a6O35544 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc1a6O35544 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Slc1a6O35544 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc1a6O35544 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc1a6O35544 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc1a6O35544 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc1a6O35544 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc1a6O35544 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc1a6O35544 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc1a6O35544 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc1a6O35544 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc1a6O35544 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc1a6O35544 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Slc1a6O35544 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc1a6O35544 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Slc1a6O35544 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.08■□□□□ 0.33
Slc1a6O35544 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc1a6O35544 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc1a6O35544 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.08■□□□□ 0.32
Slc1a6O35544 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.08■□□□□ 0.32
Slc1a6O35544 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.08■□□□□ 0.32
Slc1a6O35544 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc1a6O35544 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc1a6O35544 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.08■□□□□ 0.32
Slc1a6O35544 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc1a6O35544 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Slc1a6O35544 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc1a6O35544 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Slc1a6O35544 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc1a6O35544 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc1a6O35544 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc1a6O35544 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc1a6O35544 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc1a6O35544 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc1a6O35544 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc1a6O35544 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc1a6O35544 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc1a6O35544 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.07■□□□□ 0.32
Slc1a6O35544 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms