Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clk3O35492 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clk3O35492 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.53■□□□□ 0.24
Clk3O35492 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Clk3O35492 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clk3O35492 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Clk3O35492 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clk3O35492 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.53■□□□□ 0.24
Clk3O35492 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.53■□□□□ 0.24
Clk3O35492 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clk3O35492 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Clk3O35492 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.53■□□□□ 0.24
Clk3O35492 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.53■□□□□ 0.24
Clk3O35492 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clk3O35492 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Clk3O35492 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clk3O35492 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clk3O35492 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clk3O35492 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clk3O35492 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.53■□□□□ 0.24
Clk3O35492 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Clk3O35492 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clk3O35492 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clk3O35492 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clk3O35492 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.53■□□□□ 0.24
Clk3O35492 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clk3O35492 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clk3O35492 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clk3O35492 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clk3O35492 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.52■□□□□ 0.24
Clk3O35492 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clk3O35492 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clk3O35492 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Clk3O35492 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clk3O35492 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Clk3O35492 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clk3O35492 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Clk3O35492 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clk3O35492 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clk3O35492 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clk3O35492 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Clk3O35492 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Clk3O35492 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.52■□□□□ 0.24
Clk3O35492 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clk3O35492 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Clk3O35492 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Clk3O35492 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clk3O35492 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clk3O35492 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clk3O35492 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clk3O35492 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clk3O35492 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clk3O35492 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clk3O35492 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Clk3O35492 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Clk3O35492 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clk3O35492 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clk3O35492 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clk3O35492 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Clk3O35492 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clk3O35492 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Clk3O35492 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.51■□□□□ 0.23
Clk3O35492 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clk3O35492 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clk3O35492 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Clk3O35492 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clk3O35492 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.51■□□□□ 0.23
Clk3O35492 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clk3O35492 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clk3O35492 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Clk3O35492 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Clk3O35492 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clk3O35492 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Clk3O35492 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clk3O35492 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clk3O35492 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Clk3O35492 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clk3O35492 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.5■□□□□ 0.23
Clk3O35492 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clk3O35492 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clk3O35492 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.5■□□□□ 0.23
Clk3O35492 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clk3O35492 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Clk3O35492 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.5■□□□□ 0.23
Clk3O35492 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.5■□□□□ 0.23
Clk3O35492 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.5■□□□□ 0.23
Clk3O35492 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.5■□□□□ 0.23
Clk3O35492 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.5■□□□□ 0.23
Clk3O35492 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clk3O35492 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clk3O35492 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clk3O35492 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clk3O35492 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clk3O35492 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clk3O35492 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Clk3O35492 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clk3O35492 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clk3O35492 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.49■□□□□ 0.23
Clk3O35492 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.49■□□□□ 0.23
Clk3O35492 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms