Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf11O35235 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Tnfsf11O35235 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Tnfsf11O35235 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf11O35235 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf11O35235 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf11O35235 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf11O35235 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf11O35235 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tnfsf11O35235 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tnfsf11O35235 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
Tnfsf11O35235 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf11O35235 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf11O35235 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf11O35235 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf11O35235 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf11O35235 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf11O35235 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf11O35235 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf11O35235 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Tnfsf11O35235 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Tnfsf11O35235 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf11O35235 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf11O35235 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.57□□□□□ -0.24
Tnfsf11O35235 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf11O35235 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf11O35235 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf11O35235 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Tnfsf11O35235 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf11O35235 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Tnfsf11O35235 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf11O35235 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC13.57□□□□□ -0.24
Tnfsf11O35235 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf11O35235 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf11O35235 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf11O35235 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Tnfsf11O35235 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf11O35235 Gm43017-201ENSMUST00000198296 752 ntBASIC13.57□□□□□ -0.24
Tnfsf11O35235 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Tnfsf11O35235 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf11O35235 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf11O35235 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf11O35235 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf11O35235 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf11O35235 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf11O35235 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.57□□□□□ -0.24
Tnfsf11O35235 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf11O35235 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf11O35235 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Tnfsf11O35235 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Tnfsf11O35235 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf11O35235 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf11O35235 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Tnfsf11O35235 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf11O35235 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf11O35235 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf11O35235 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf11O35235 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf11O35235 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf11O35235 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf11O35235 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf11O35235 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf11O35235 Gm13216-201ENSMUST00000117145 591 ntBASIC13.56□□□□□ -0.24
Tnfsf11O35235 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC13.56□□□□□ -0.24
Tnfsf11O35235 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf11O35235 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf11O35235 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Tnfsf11O35235 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Tnfsf11O35235 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf11O35235 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.56□□□□□ -0.24
Tnfsf11O35235 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf11O35235 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf11O35235 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf11O35235 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.56□□□□□ -0.24
Tnfsf11O35235 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Tnfsf11O35235 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf11O35235 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf11O35235 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tnfsf11O35235 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf11O35235 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Tnfsf11O35235 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf11O35235 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf11O35235 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf11O35235 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf11O35235 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf11O35235 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf11O35235 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Tnfsf11O35235 Cdc34b-202ENSMUST00000188741 1252 ntBASIC13.55□□□□□ -0.24
Tnfsf11O35235 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC13.55□□□□□ -0.24
Tnfsf11O35235 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf11O35235 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Tnfsf11O35235 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf11O35235 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf11O35235 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Tnfsf11O35235 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf11O35235 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf11O35235 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf11O35235 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf11O35235 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.55□□□□□ -0.24
Tnfsf11O35235 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms