Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cx3cl1O35188 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cx3cl1O35188 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cx3cl1O35188 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cx3cl1O35188 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cx3cl1O35188 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.29■□□□□ 0.2
Cx3cl1O35188 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cx3cl1O35188 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cx3cl1O35188 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Cx3cl1O35188 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cx3cl1O35188 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cx3cl1O35188 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.29■□□□□ 0.2
Cx3cl1O35188 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.29■□□□□ 0.2
Cx3cl1O35188 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cx3cl1O35188 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cx3cl1O35188 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.29■□□□□ 0.2
Cx3cl1O35188 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Cx3cl1O35188 Gm4974-201ENSMUST00000209974 875 ntBASIC16.29■□□□□ 0.2
Cx3cl1O35188 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.29■□□□□ 0.2
Cx3cl1O35188 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.29■□□□□ 0.2
Cx3cl1O35188 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cx3cl1O35188 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cx3cl1O35188 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cx3cl1O35188 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cx3cl1O35188 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cx3cl1O35188 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cx3cl1O35188 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cx3cl1O35188 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Cx3cl1O35188 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cx3cl1O35188 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cx3cl1O35188 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cx3cl1O35188 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cx3cl1O35188 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.29■□□□□ 0.2
Cx3cl1O35188 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Cx3cl1O35188 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cx3cl1O35188 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cx3cl1O35188 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cx3cl1O35188 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cx3cl1O35188 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cx3cl1O35188 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.28■□□□□ 0.2
Cx3cl1O35188 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.28■□□□□ 0.2
Cx3cl1O35188 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cx3cl1O35188 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Cx3cl1O35188 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cx3cl1O35188 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cx3cl1O35188 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cx3cl1O35188 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cx3cl1O35188 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cx3cl1O35188 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cx3cl1O35188 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cx3cl1O35188 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cx3cl1O35188 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cx3cl1O35188 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cx3cl1O35188 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cx3cl1O35188 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cx3cl1O35188 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cx3cl1O35188 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cx3cl1O35188 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cx3cl1O35188 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Cx3cl1O35188 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cx3cl1O35188 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cx3cl1O35188 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Cx3cl1O35188 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cx3cl1O35188 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cx3cl1O35188 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cx3cl1O35188 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cx3cl1O35188 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cx3cl1O35188 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cx3cl1O35188 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cx3cl1O35188 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cx3cl1O35188 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cx3cl1O35188 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cx3cl1O35188 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cx3cl1O35188 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cx3cl1O35188 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cx3cl1O35188 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cx3cl1O35188 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.26■□□□□ 0.19
Cx3cl1O35188 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.26■□□□□ 0.19
Cx3cl1O35188 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Cx3cl1O35188 Mir5122-201ENSMUST00000175004 89 ntBASIC16.26■□□□□ 0.19
Cx3cl1O35188 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cx3cl1O35188 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.26■□□□□ 0.19
Cx3cl1O35188 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cx3cl1O35188 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cx3cl1O35188 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.26■□□□□ 0.19
Cx3cl1O35188 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cx3cl1O35188 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cx3cl1O35188 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
Cx3cl1O35188 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cx3cl1O35188 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cx3cl1O35188 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cx3cl1O35188 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cx3cl1O35188 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.26■□□□□ 0.19
Cx3cl1O35188 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cx3cl1O35188 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cx3cl1O35188 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cx3cl1O35188 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cx3cl1O35188 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.25■□□□□ 0.19
Cx3cl1O35188 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cx3cl1O35188 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms