Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ebf3O08791 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ebf3O08791 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ebf3O08791 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ebf3O08791 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.01■□□□□ 0.47
Ebf3O08791 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ebf3O08791 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18■□□□□ 0.47
Ebf3O08791 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ebf3O08791 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Ebf3O08791 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Ebf3O08791 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ebf3O08791 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ebf3O08791 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ebf3O08791 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ebf3O08791 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18■□□□□ 0.47
Ebf3O08791 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ebf3O08791 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ebf3O08791 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ebf3O08791 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Ebf3O08791 Gm7856-201ENSMUST00000117514 1493 ntBASIC18■□□□□ 0.47
Ebf3O08791 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ebf3O08791 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ebf3O08791 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ebf3O08791 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Ebf3O08791 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ebf3O08791 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ebf3O08791 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ebf3O08791 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ebf3O08791 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ebf3O08791 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ebf3O08791 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.99■□□□□ 0.47
Ebf3O08791 Gm6345-202ENSMUST00000180900 204 ntBASIC17.99■□□□□ 0.47
Ebf3O08791 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ebf3O08791 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ebf3O08791 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ebf3O08791 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ebf3O08791 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Ebf3O08791 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.99■□□□□ 0.47
Ebf3O08791 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ebf3O08791 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ebf3O08791 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ebf3O08791 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.99■□□□□ 0.47
Ebf3O08791 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ebf3O08791 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ebf3O08791 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.99■□□□□ 0.47
Ebf3O08791 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ebf3O08791 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ebf3O08791 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ebf3O08791 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ebf3O08791 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ebf3O08791 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ebf3O08791 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ebf3O08791 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ebf3O08791 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.98■□□□□ 0.47
Ebf3O08791 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ebf3O08791 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ebf3O08791 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ebf3O08791 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ebf3O08791 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ebf3O08791 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ebf3O08791 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ebf3O08791 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.97■□□□□ 0.47
Ebf3O08791 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ebf3O08791 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.97■□□□□ 0.47
Ebf3O08791 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ebf3O08791 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ebf3O08791 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ebf3O08791 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ebf3O08791 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ebf3O08791 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.97■□□□□ 0.47
Ebf3O08791 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ebf3O08791 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ebf3O08791 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ebf3O08791 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ebf3O08791 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ebf3O08791 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ebf3O08791 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ebf3O08791 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ebf3O08791 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ebf3O08791 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ebf3O08791 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.96■□□□□ 0.47
Ebf3O08791 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.96■□□□□ 0.47
Ebf3O08791 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.96■□□□□ 0.47
Ebf3O08791 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.96■□□□□ 0.47
Ebf3O08791 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ebf3O08791 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ebf3O08791 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ebf3O08791 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ebf3O08791 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ebf3O08791 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ebf3O08791 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ebf3O08791 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ebf3O08791 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ebf3O08791 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.96■□□□□ 0.47
Ebf3O08791 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ebf3O08791 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Ebf3O08791 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Ebf3O08791 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ebf3O08791 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.95■□□□□ 0.46
Ebf3O08791 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms