Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf11bO08712 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.68■□□□□ 0.42
Tnfrsf11bO08712 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf11bO08712 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf11bO08712 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf11bO08712 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf11bO08712 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf11bO08712 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Tnfrsf11bO08712 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Tnfrsf11bO08712 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.68■□□□□ 0.42
Tnfrsf11bO08712 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.68■□□□□ 0.42
Tnfrsf11bO08712 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf11bO08712 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf11bO08712 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf11bO08712 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.68■□□□□ 0.42
Tnfrsf11bO08712 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf11bO08712 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf11bO08712 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf11bO08712 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf11bO08712 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf11bO08712 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf11bO08712 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Tnfrsf11bO08712 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf11bO08712 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Tnfrsf11bO08712 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Tnfrsf11bO08712 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf11bO08712 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf11bO08712 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.67■□□□□ 0.42
Tnfrsf11bO08712 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf11bO08712 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf11bO08712 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf11bO08712 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf11bO08712 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf11bO08712 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf11bO08712 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf11bO08712 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf11bO08712 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.67■□□□□ 0.42
Tnfrsf11bO08712 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf11bO08712 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf11bO08712 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf11bO08712 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf11bO08712 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf11bO08712 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf11bO08712 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf11bO08712 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf11bO08712 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf11bO08712 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf11bO08712 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf11bO08712 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf11bO08712 Gm6576-201ENSMUST00000169678 883 ntBASIC17.66■□□□□ 0.42
Tnfrsf11bO08712 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf11bO08712 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.66■□□□□ 0.42
Tnfrsf11bO08712 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf11bO08712 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf11bO08712 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Tnfrsf11bO08712 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf11bO08712 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Tnfrsf11bO08712 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf11bO08712 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf11bO08712 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf11bO08712 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.65■□□□□ 0.42
Tnfrsf11bO08712 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf11bO08712 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Tnfrsf11bO08712 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf11bO08712 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf11bO08712 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Tnfrsf11bO08712 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Tnfrsf11bO08712 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf11bO08712 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf11bO08712 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Tnfrsf11bO08712 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Tnfrsf11bO08712 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf11bO08712 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf11bO08712 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf11bO08712 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf11bO08712 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf11bO08712 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Tnfrsf11bO08712 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf11bO08712 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf11bO08712 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf11bO08712 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf11bO08712 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Tnfrsf11bO08712 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.64■□□□□ 0.41
Tnfrsf11bO08712 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf11bO08712 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf11bO08712 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf11bO08712 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf11bO08712 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf11bO08712 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf11bO08712 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.63■□□□□ 0.41
Tnfrsf11bO08712 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf11bO08712 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.63■□□□□ 0.41
Tnfrsf11bO08712 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Tnfrsf11bO08712 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf11bO08712 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf11bO08712 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf11bO08712 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Tnfrsf11bO08712 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf11bO08712 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Tnfrsf11bO08712 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms