Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3139J3QK78 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3139J3QK78 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3139J3QK78 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3139J3QK78 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.34■□□□□ 0.37
Gm3139J3QK78 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3139J3QK78 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3139J3QK78 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Gm3139J3QK78 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Gm3139J3QK78 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3139J3QK78 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3139J3QK78 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.34■□□□□ 0.37
Gm3139J3QK78 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3139J3QK78 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3139J3QK78 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.33■□□□□ 0.37
Gm3139J3QK78 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Gm3139J3QK78 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Gm3139J3QK78 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm3139J3QK78 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Gm3139J3QK78 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Gm3139J3QK78 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.33■□□□□ 0.37
Gm3139J3QK78 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3139J3QK78 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3139J3QK78 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3139J3QK78 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3139J3QK78 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3139J3QK78 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.33■□□□□ 0.36
Gm3139J3QK78 Gm8969-201ENSMUST00000199694 526 ntBASIC17.33■□□□□ 0.36
Gm3139J3QK78 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3139J3QK78 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.33■□□□□ 0.36
Gm3139J3QK78 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3139J3QK78 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3139J3QK78 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3139J3QK78 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3139J3QK78 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3139J3QK78 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3139J3QK78 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3139J3QK78 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3139J3QK78 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
Gm3139J3QK78 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3139J3QK78 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3139J3QK78 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Gm3139J3QK78 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3139J3QK78 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3139J3QK78 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.32■□□□□ 0.36
Gm3139J3QK78 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3139J3QK78 Gm17661-201ENSMUST00000170317 270 ntBASIC17.32■□□□□ 0.36
Gm3139J3QK78 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3139J3QK78 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Gm3139J3QK78 Gm2274-201ENSMUST00000184539 609 ntBASIC17.32■□□□□ 0.36
Gm3139J3QK78 Gm7889-201ENSMUST00000185591 958 ntBASIC17.32■□□□□ 0.36
Gm3139J3QK78 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.32■□□□□ 0.36
Gm3139J3QK78 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3139J3QK78 Gm7791-201ENSMUST00000219066 539 ntBASIC17.32■□□□□ 0.36
Gm3139J3QK78 Il3ra-202ENSMUST00000223589 738 ntBASIC17.32■□□□□ 0.36
Gm3139J3QK78 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3139J3QK78 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3139J3QK78 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3139J3QK78 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3139J3QK78 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3139J3QK78 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm3139J3QK78 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm3139J3QK78 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm3139J3QK78 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Gm3139J3QK78 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm3139J3QK78 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm3139J3QK78 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm3139J3QK78 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Gm3139J3QK78 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm3139J3QK78 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.31■□□□□ 0.36
Gm3139J3QK78 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm3139J3QK78 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm3139J3QK78 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm3139J3QK78 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Gm3139J3QK78 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Gm3139J3QK78 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm3139J3QK78 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.3■□□□□ 0.36
Gm3139J3QK78 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm3139J3QK78 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Gm3139J3QK78 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm3139J3QK78 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm3139J3QK78 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm3139J3QK78 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm3139J3QK78 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm3139J3QK78 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm3139J3QK78 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm3139J3QK78 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm3139J3QK78 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm3139J3QK78 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm3139J3QK78 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.3■□□□□ 0.36
Gm3139J3QK78 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm3139J3QK78 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.3■□□□□ 0.36
Gm3139J3QK78 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm3139J3QK78 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm3139J3QK78 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm3139J3QK78 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Gm3139J3QK78 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.3■□□□□ 0.36
Gm3139J3QK78 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.29■□□□□ 0.36
Gm3139J3QK78 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm3139J3QK78 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms