Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC26.38■■□□□ 1.81
Pcf11G3X9Z4 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
Pcf11G3X9Z4 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Pcf11G3X9Z4 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Pcf11G3X9Z4 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Pcf11G3X9Z4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Pcf11G3X9Z4 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC26.37■■□□□ 1.81
Pcf11G3X9Z4 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Pcf11G3X9Z4 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC26.37■■□□□ 1.81
Pcf11G3X9Z4 Mir3081-201ENSMUST00000175305 84 ntBASIC26.37■■□□□ 1.81
Pcf11G3X9Z4 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Pcf11G3X9Z4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Pcf11G3X9Z4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Pcf11G3X9Z4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
Pcf11G3X9Z4 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pcf11G3X9Z4 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pcf11G3X9Z4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pcf11G3X9Z4 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
Pcf11G3X9Z4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Pcf11G3X9Z4 Gm6623-201ENSMUST00000173570 544 ntBASIC26.36■■□□□ 1.81
Pcf11G3X9Z4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Pcf11G3X9Z4 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pcf11G3X9Z4 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pcf11G3X9Z4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pcf11G3X9Z4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pcf11G3X9Z4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pcf11G3X9Z4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pcf11G3X9Z4 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pcf11G3X9Z4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Pcf11G3X9Z4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Pcf11G3X9Z4 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pcf11G3X9Z4 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pcf11G3X9Z4 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC26.35■■□□□ 1.81
Pcf11G3X9Z4 AC125350.1-201ENSMUST00000225115 903 ntBASIC26.35■■□□□ 1.81
Pcf11G3X9Z4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC26.35■■□□□ 1.81
Pcf11G3X9Z4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Pcf11G3X9Z4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pcf11G3X9Z4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Pcf11G3X9Z4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Pcf11G3X9Z4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Pcf11G3X9Z4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC26.34■■□□□ 1.81
Pcf11G3X9Z4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Pcf11G3X9Z4 Gm7153-201ENSMUST00000117092 455 ntBASIC26.34■■□□□ 1.81
Pcf11G3X9Z4 Gm13186-201ENSMUST00000118031 316 ntBASIC26.34■■□□□ 1.81
Pcf11G3X9Z4 Gm15794-201ENSMUST00000120182 631 ntBASIC26.34■■□□□ 1.81
Pcf11G3X9Z4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
Pcf11G3X9Z4 Gm27742-201ENSMUST00000184667 60 ntBASIC26.34■■□□□ 1.81
Pcf11G3X9Z4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC26.34■■□□□ 1.81
Pcf11G3X9Z4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Pcf11G3X9Z4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Pcf11G3X9Z4 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
Pcf11G3X9Z4 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Pcf11G3X9Z4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Pcf11G3X9Z4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Pcf11G3X9Z4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Pcf11G3X9Z4 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
Pcf11G3X9Z4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
Pcf11G3X9Z4 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Pcf11G3X9Z4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Pcf11G3X9Z4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
Pcf11G3X9Z4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
Pcf11G3X9Z4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Pcf11G3X9Z4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.8
Pcf11G3X9Z4 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC26.33■■□□□ 1.8
Pcf11G3X9Z4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Pcf11G3X9Z4 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Pcf11G3X9Z4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC26.33■■□□□ 1.8
Pcf11G3X9Z4 Gm5953-201ENSMUST00000220644 2616 ntBASIC26.32■■□□□ 1.8
Pcf11G3X9Z4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
Pcf11G3X9Z4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
Pcf11G3X9Z4 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC26.32■■□□□ 1.8
Pcf11G3X9Z4 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Pcf11G3X9Z4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC26.32■■□□□ 1.8
Pcf11G3X9Z4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Pcf11G3X9Z4 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Pcf11G3X9Z4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Pcf11G3X9Z4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pcf11G3X9Z4 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pcf11G3X9Z4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pcf11G3X9Z4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pcf11G3X9Z4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pcf11G3X9Z4 Olfr129-201ENSMUST00000122318 993 ntBASIC26.31■■□□□ 1.8
Pcf11G3X9Z4 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC26.31■■□□□ 1.8
Pcf11G3X9Z4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pcf11G3X9Z4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
Pcf11G3X9Z4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Pcf11G3X9Z4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pcf11G3X9Z4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pcf11G3X9Z4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC26.3■■□□□ 1.8
Pcf11G3X9Z4 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC26.3■■□□□ 1.8
Pcf11G3X9Z4 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Pcf11G3X9Z4 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
Pcf11G3X9Z4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Pcf11G3X9Z4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Pcf11G3X9Z4 Gm6190-201ENSMUST00000220683 1374 ntBASIC26.29■■□□□ 1.8
Pcf11G3X9Z4 Phf7-203ENSMUST00000226565 1971 ntBASIC26.29■■□□□ 1.8
Pcf11G3X9Z4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Pcf11G3X9Z4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pcf11G3X9Z4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pcf11G3X9Z4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms