Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.83■□□□□ 0.45
Pcdh9F8VPK8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdh9F8VPK8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.83■□□□□ 0.45
Pcdh9F8VPK8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh9F8VPK8 Gm29257-201ENSMUST00000186115 639 ntBASIC17.83■□□□□ 0.44
Pcdh9F8VPK8 Gm2559-201ENSMUST00000201323 363 ntBASIC17.83■□□□□ 0.44
Pcdh9F8VPK8 Gm10138-203ENSMUST00000206952 366 ntBASIC17.83■□□□□ 0.44
Pcdh9F8VPK8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.83■□□□□ 0.44
Pcdh9F8VPK8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.83■□□□□ 0.44
Pcdh9F8VPK8 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.83■□□□□ 0.44
Pcdh9F8VPK8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.83■□□□□ 0.44
Pcdh9F8VPK8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh9F8VPK8 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh9F8VPK8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Pcdh9F8VPK8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh9F8VPK8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Pcdh9F8VPK8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh9F8VPK8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Pcdh9F8VPK8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Pcdh9F8VPK8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh9F8VPK8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh9F8VPK8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh9F8VPK8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.82■□□□□ 0.44
Pcdh9F8VPK8 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.82■□□□□ 0.44
Pcdh9F8VPK8 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh9F8VPK8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh9F8VPK8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh9F8VPK8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh9F8VPK8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh9F8VPK8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.82■□□□□ 0.44
Pcdh9F8VPK8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh9F8VPK8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh9F8VPK8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh9F8VPK8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh9F8VPK8 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh9F8VPK8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh9F8VPK8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh9F8VPK8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh9F8VPK8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh9F8VPK8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh9F8VPK8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh9F8VPK8 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Pcdh9F8VPK8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh9F8VPK8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdh9F8VPK8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh9F8VPK8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh9F8VPK8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh9F8VPK8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Pcdh9F8VPK8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh9F8VPK8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh9F8VPK8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh9F8VPK8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh9F8VPK8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh9F8VPK8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh9F8VPK8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh9F8VPK8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pcdh9F8VPK8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh9F8VPK8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh9F8VPK8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Pcdh9F8VPK8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.8■□□□□ 0.44
Pcdh9F8VPK8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdh9F8VPK8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh9F8VPK8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh9F8VPK8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Pcdh9F8VPK8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh9F8VPK8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdh9F8VPK8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh9F8VPK8 Dio3-201ENSMUST00000097228 1449 ntBASIC17.8■□□□□ 0.44
Pcdh9F8VPK8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh9F8VPK8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh9F8VPK8 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.79■□□□□ 0.44
Pcdh9F8VPK8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh9F8VPK8 Gm15375-201ENSMUST00000119510 849 ntBASIC17.79■□□□□ 0.44
Pcdh9F8VPK8 Gm12441-201ENSMUST00000121806 588 ntBASIC17.79■□□□□ 0.44
Pcdh9F8VPK8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Pcdh9F8VPK8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh9F8VPK8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh9F8VPK8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh9F8VPK8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh9F8VPK8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh9F8VPK8 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.79■□□□□ 0.44
Pcdh9F8VPK8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pcdh9F8VPK8 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Pcdh9F8VPK8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh9F8VPK8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh9F8VPK8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Pcdh9F8VPK8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh9F8VPK8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Pcdh9F8VPK8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh9F8VPK8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdh9F8VPK8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh9F8VPK8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh9F8VPK8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdh9F8VPK8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Pcdh9F8VPK8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh9F8VPK8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh9F8VPK8 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdh9F8VPK8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Pcdh9F8VPK8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh9F8VPK8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms