Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ube4aE9Q735 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ube4aE9Q735 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ube4aE9Q735 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ube4aE9Q735 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ube4aE9Q735 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ube4aE9Q735 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ube4aE9Q735 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ube4aE9Q735 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ube4aE9Q735 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ube4aE9Q735 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Ube4aE9Q735 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ube4aE9Q735 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Ube4aE9Q735 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ube4aE9Q735 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.9■□□□□ 0.94
Ube4aE9Q735 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Ube4aE9Q735 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
Ube4aE9Q735 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ube4aE9Q735 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Ube4aE9Q735 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20.89■□□□□ 0.93
Ube4aE9Q735 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ube4aE9Q735 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Ube4aE9Q735 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.89■□□□□ 0.93
Ube4aE9Q735 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.89■□□□□ 0.93
Ube4aE9Q735 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ube4aE9Q735 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ube4aE9Q735 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ube4aE9Q735 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ube4aE9Q735 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ube4aE9Q735 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.88■□□□□ 0.93
Ube4aE9Q735 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ube4aE9Q735 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Ube4aE9Q735 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC20.88■□□□□ 0.93
Ube4aE9Q735 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC20.88■□□□□ 0.93
Ube4aE9Q735 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ube4aE9Q735 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ube4aE9Q735 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ube4aE9Q735 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ube4aE9Q735 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ube4aE9Q735 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ube4aE9Q735 Gm11950-201ENSMUST00000121615 838 ntBASIC20.87■□□□□ 0.93
Ube4aE9Q735 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.87■□□□□ 0.93
Ube4aE9Q735 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.87■□□□□ 0.93
Ube4aE9Q735 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ube4aE9Q735 Gm37722-201ENSMUST00000193757 208 ntBASIC20.87■□□□□ 0.93
Ube4aE9Q735 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ube4aE9Q735 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ube4aE9Q735 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ube4aE9Q735 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ube4aE9Q735 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube4aE9Q735 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ube4aE9Q735 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube4aE9Q735 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ube4aE9Q735 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube4aE9Q735 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube4aE9Q735 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube4aE9Q735 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube4aE9Q735 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube4aE9Q735 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube4aE9Q735 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube4aE9Q735 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Ube4aE9Q735 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.86■□□□□ 0.93
Ube4aE9Q735 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Ube4aE9Q735 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube4aE9Q735 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Ube4aE9Q735 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube4aE9Q735 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ube4aE9Q735 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ube4aE9Q735 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ube4aE9Q735 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ube4aE9Q735 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ube4aE9Q735 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC20.85■□□□□ 0.93
Ube4aE9Q735 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ube4aE9Q735 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Ube4aE9Q735 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
Ube4aE9Q735 Gm27741-201ENSMUST00000185060 237 ntBASIC20.85■□□□□ 0.93
Ube4aE9Q735 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.85■□□□□ 0.93
Ube4aE9Q735 Grk6-206ENSMUST00000224995 2971 ntBASIC20.85■□□□□ 0.93
Ube4aE9Q735 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Ube4aE9Q735 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Ube4aE9Q735 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Ube4aE9Q735 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC20.85■□□□□ 0.93
Ube4aE9Q735 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.85■□□□□ 0.93
Ube4aE9Q735 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.85■□□□□ 0.93
Ube4aE9Q735 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ube4aE9Q735 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ube4aE9Q735 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Ube4aE9Q735 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Ube4aE9Q735 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ube4aE9Q735 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.84■□□□□ 0.93
Ube4aE9Q735 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.84■□□□□ 0.93
Ube4aE9Q735 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ube4aE9Q735 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ube4aE9Q735 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ube4aE9Q735 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ube4aE9Q735 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Ube4aE9Q735 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.83■□□□□ 0.93
Ube4aE9Q735 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ube4aE9Q735 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Ube4aE9Q735 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms