Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Herc1E9PZP8 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Herc1E9PZP8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Herc1E9PZP8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Herc1E9PZP8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Herc1E9PZP8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Herc1E9PZP8 Gm37352-201ENSMUST00000193908 2181 ntBASIC9.8□□□□□ -0.84
Herc1E9PZP8 Gm13036-201ENSMUST00000117799 748 ntBASIC9.8□□□□□ -0.84
Herc1E9PZP8 Mir3102-201ENSMUST00000175555 104 ntBASIC9.8□□□□□ -0.84
Herc1E9PZP8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Herc1E9PZP8 AC131187.1-201ENSMUST00000224567 809 ntBASIC9.8□□□□□ -0.84
Herc1E9PZP8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Herc1E9PZP8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Herc1E9PZP8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC9.8□□□□□ -0.84
Herc1E9PZP8 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Herc1E9PZP8 Rprl3-201ENSMUST00000157400 290 ntBASIC9.8□□□□□ -0.84
Herc1E9PZP8 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Herc1E9PZP8 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Herc1E9PZP8 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Herc1E9PZP8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Herc1E9PZP8 Gm9899-201ENSMUST00000065519 555 ntBASIC9.8□□□□□ -0.84
Herc1E9PZP8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Herc1E9PZP8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Herc1E9PZP8 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Herc1E9PZP8 Gm24841-201ENSMUST00000158676 357 ntBASIC9.8□□□□□ -0.84
Herc1E9PZP8 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Herc1E9PZP8 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC9.8□□□□□ -0.84
Herc1E9PZP8 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC9.8□□□□□ -0.84
Herc1E9PZP8 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Herc1E9PZP8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Herc1E9PZP8 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Herc1E9PZP8 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC9.79□□□□□ -0.84
Herc1E9PZP8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Herc1E9PZP8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Herc1E9PZP8 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Herc1E9PZP8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Herc1E9PZP8 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC9.79□□□□□ -0.84
Herc1E9PZP8 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC9.79□□□□□ -0.84
Herc1E9PZP8 Mir8117-201ENSMUST00000184773 107 ntBASIC9.79□□□□□ -0.84
Herc1E9PZP8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Herc1E9PZP8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Herc1E9PZP8 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
Herc1E9PZP8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Herc1E9PZP8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
Herc1E9PZP8 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC9.79□□□□□ -0.84
Herc1E9PZP8 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Herc1E9PZP8 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Herc1E9PZP8 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Herc1E9PZP8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Herc1E9PZP8 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Herc1E9PZP8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Herc1E9PZP8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc1E9PZP8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Herc1E9PZP8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc1E9PZP8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Herc1E9PZP8 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc1E9PZP8 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc1E9PZP8 Il17rd-202ENSMUST00000223942 2186 ntBASIC9.78□□□□□ -0.84
Herc1E9PZP8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Herc1E9PZP8 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc1E9PZP8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC9.78□□□□□ -0.84
Herc1E9PZP8 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc1E9PZP8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Herc1E9PZP8 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc1E9PZP8 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc1E9PZP8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Herc1E9PZP8 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
Herc1E9PZP8 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC9.78□□□□□ -0.84
Herc1E9PZP8 Gm44945-201ENSMUST00000206764 1187 ntBASIC9.78□□□□□ -0.84
Herc1E9PZP8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc1E9PZP8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc1E9PZP8 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc1E9PZP8 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Herc1E9PZP8 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Herc1E9PZP8 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC9.78□□□□□ -0.84
Herc1E9PZP8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc1E9PZP8 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Herc1E9PZP8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Herc1E9PZP8 Gm45640-201ENSMUST00000210665 1896 ntBASIC9.77□□□□□ -0.84
Herc1E9PZP8 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.84
Herc1E9PZP8 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Herc1E9PZP8 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC9.77□□□□□ -0.84
Herc1E9PZP8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
Herc1E9PZP8 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC9.77□□□□□ -0.85
Herc1E9PZP8 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Herc1E9PZP8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC9.77□□□□□ -0.85
Herc1E9PZP8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Herc1E9PZP8 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Herc1E9PZP8 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Herc1E9PZP8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Herc1E9PZP8 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Herc1E9PZP8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Herc1E9PZP8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Herc1E9PZP8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Herc1E9PZP8 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Herc1E9PZP8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Herc1E9PZP8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Herc1E9PZP8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Herc1E9PZP8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Herc1E9PZP8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms