Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm28043E0CXC2 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.43■□□□□ 0.38
Gm28043E0CXC2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Gm28043E0CXC2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm28043E0CXC2 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm28043E0CXC2 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.43■□□□□ 0.38
Gm28043E0CXC2 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Gm28043E0CXC2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.43■□□□□ 0.38
Gm28043E0CXC2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm28043E0CXC2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm28043E0CXC2 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.43■□□□□ 0.38
Gm28043E0CXC2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Gm28043E0CXC2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Gm28043E0CXC2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gm28043E0CXC2 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gm28043E0CXC2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm28043E0CXC2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Gm28043E0CXC2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gm28043E0CXC2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.42■□□□□ 0.38
Gm28043E0CXC2 Gm5408-201ENSMUST00000197998 747 ntBASIC17.42■□□□□ 0.38
Gm28043E0CXC2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm28043E0CXC2 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm28043E0CXC2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm28043E0CXC2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.42■□□□□ 0.38
Gm28043E0CXC2 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm28043E0CXC2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm28043E0CXC2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm28043E0CXC2 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gm28043E0CXC2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm28043E0CXC2 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm28043E0CXC2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gm28043E0CXC2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm28043E0CXC2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
Gm28043E0CXC2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Gm28043E0CXC2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Gm28043E0CXC2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm28043E0CXC2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm28043E0CXC2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm28043E0CXC2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Gm28043E0CXC2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm28043E0CXC2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm28043E0CXC2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.41■□□□□ 0.38
Gm28043E0CXC2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm28043E0CXC2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm28043E0CXC2 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm28043E0CXC2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm28043E0CXC2 Gm8969-201ENSMUST00000199694 526 ntBASIC17.41■□□□□ 0.38
Gm28043E0CXC2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.41■□□□□ 0.38
Gm28043E0CXC2 Gm44549-201ENSMUST00000208351 577 ntBASIC17.41■□□□□ 0.38
Gm28043E0CXC2 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.41■□□□□ 0.38
Gm28043E0CXC2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm28043E0CXC2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Gm28043E0CXC2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm28043E0CXC2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm28043E0CXC2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm28043E0CXC2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm28043E0CXC2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm28043E0CXC2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm28043E0CXC2 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm28043E0CXC2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Gm28043E0CXC2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.4■□□□□ 0.38
Gm28043E0CXC2 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.4■□□□□ 0.38
Gm28043E0CXC2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm28043E0CXC2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.4■□□□□ 0.38
Gm28043E0CXC2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm28043E0CXC2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm28043E0CXC2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Gm28043E0CXC2 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.4■□□□□ 0.38
Gm28043E0CXC2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.4■□□□□ 0.38
Gm28043E0CXC2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.4■□□□□ 0.38
Gm28043E0CXC2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm28043E0CXC2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm28043E0CXC2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm28043E0CXC2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Gm28043E0CXC2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Gm28043E0CXC2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Gm28043E0CXC2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.39■□□□□ 0.37
Gm28043E0CXC2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Gm28043E0CXC2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.39■□□□□ 0.37
Gm28043E0CXC2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.39■□□□□ 0.37
Gm28043E0CXC2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.39■□□□□ 0.37
Gm28043E0CXC2 Gm4968-201ENSMUST00000071458 858 ntBASIC17.39■□□□□ 0.37
Gm28043E0CXC2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm28043E0CXC2 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm28043E0CXC2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm28043E0CXC2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm28043E0CXC2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm28043E0CXC2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm28043E0CXC2 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
Gm28043E0CXC2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm28043E0CXC2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm28043E0CXC2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm28043E0CXC2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm28043E0CXC2 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Gm28043E0CXC2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Gm28043E0CXC2 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm28043E0CXC2 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm28043E0CXC2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm28043E0CXC2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Gm28043E0CXC2 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms