Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx8D3YU81 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx8D3YU81 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx8D3YU81 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx8D3YU81 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx8D3YU81 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.4■□□□□ 0.54
Rfx8D3YU81 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx8D3YU81 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Rfx8D3YU81 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.4■□□□□ 0.54
Rfx8D3YU81 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx8D3YU81 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx8D3YU81 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx8D3YU81 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rfx8D3YU81 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Rfx8D3YU81 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx8D3YU81 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx8D3YU81 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx8D3YU81 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx8D3YU81 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx8D3YU81 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx8D3YU81 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx8D3YU81 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx8D3YU81 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx8D3YU81 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx8D3YU81 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx8D3YU81 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx8D3YU81 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.39■□□□□ 0.53
Rfx8D3YU81 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx8D3YU81 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx8D3YU81 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx8D3YU81 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Rfx8D3YU81 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rfx8D3YU81 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx8D3YU81 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx8D3YU81 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.38■□□□□ 0.53
Rfx8D3YU81 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx8D3YU81 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.38■□□□□ 0.53
Rfx8D3YU81 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx8D3YU81 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx8D3YU81 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx8D3YU81 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx8D3YU81 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx8D3YU81 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx8D3YU81 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx8D3YU81 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx8D3YU81 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx8D3YU81 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.38■□□□□ 0.53
Rfx8D3YU81 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx8D3YU81 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx8D3YU81 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx8D3YU81 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx8D3YU81 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx8D3YU81 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx8D3YU81 Mir1199-201ENSMUST00000117015 119 ntBASIC18.37■□□□□ 0.53
Rfx8D3YU81 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx8D3YU81 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.37■□□□□ 0.53
Rfx8D3YU81 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rfx8D3YU81 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx8D3YU81 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rfx8D3YU81 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Rfx8D3YU81 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx8D3YU81 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx8D3YU81 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx8D3YU81 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx8D3YU81 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx8D3YU81 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx8D3YU81 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
Rfx8D3YU81 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx8D3YU81 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx8D3YU81 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx8D3YU81 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx8D3YU81 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Rfx8D3YU81 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rfx8D3YU81 Mir8112-201ENSMUST00000184382 131 ntBASIC18.36■□□□□ 0.53
Rfx8D3YU81 Gm4974-201ENSMUST00000209974 875 ntBASIC18.36■□□□□ 0.53
Rfx8D3YU81 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx8D3YU81 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx8D3YU81 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.36■□□□□ 0.53
Rfx8D3YU81 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.36■□□□□ 0.53
Rfx8D3YU81 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx8D3YU81 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
Rfx8D3YU81 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rfx8D3YU81 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.35■□□□□ 0.53
Rfx8D3YU81 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx8D3YU81 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx8D3YU81 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.35■□□□□ 0.53
Rfx8D3YU81 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.35■□□□□ 0.53
Rfx8D3YU81 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx8D3YU81 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx8D3YU81 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx8D3YU81 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Rfx8D3YU81 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx8D3YU81 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx8D3YU81 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.35■□□□□ 0.53
Rfx8D3YU81 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx8D3YU81 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rfx8D3YU81 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.34■□□□□ 0.53
Rfx8D3YU81 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx8D3YU81 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx8D3YU81 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms