Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ptchd4B9EKX1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ptchd4B9EKX1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ptchd4B9EKX1 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ptchd4B9EKX1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Ptchd4B9EKX1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ptchd4B9EKX1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.66■□□□□ 0.58
Ptchd4B9EKX1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.66■□□□□ 0.58
Ptchd4B9EKX1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ptchd4B9EKX1 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ptchd4B9EKX1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Ptchd4B9EKX1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ptchd4B9EKX1 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ptchd4B9EKX1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ptchd4B9EKX1 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.66■□□□□ 0.58
Ptchd4B9EKX1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.66■□□□□ 0.58
Ptchd4B9EKX1 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.66■□□□□ 0.58
Ptchd4B9EKX1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Ptchd4B9EKX1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ptchd4B9EKX1 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ptchd4B9EKX1 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ptchd4B9EKX1 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Ptchd4B9EKX1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ptchd4B9EKX1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.66■□□□□ 0.58
Ptchd4B9EKX1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Ptchd4B9EKX1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ptchd4B9EKX1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptchd4B9EKX1 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptchd4B9EKX1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptchd4B9EKX1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptchd4B9EKX1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ptchd4B9EKX1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptchd4B9EKX1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.65■□□□□ 0.58
Ptchd4B9EKX1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptchd4B9EKX1 Gm11355-201ENSMUST00000121120 306 ntBASIC18.65■□□□□ 0.58
Ptchd4B9EKX1 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ptchd4B9EKX1 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.65■□□□□ 0.58
Ptchd4B9EKX1 Gm26039-201ENSMUST00000158152 144 ntBASIC18.65■□□□□ 0.58
Ptchd4B9EKX1 Ank2-226ENSMUST00000189368 339 ntBASIC18.65■□□□□ 0.58
Ptchd4B9EKX1 Gm29518-201ENSMUST00000190858 372 ntBASIC18.65■□□□□ 0.58
Ptchd4B9EKX1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.65■□□□□ 0.58
Ptchd4B9EKX1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ptchd4B9EKX1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ptchd4B9EKX1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.65■□□□□ 0.58
Ptchd4B9EKX1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptchd4B9EKX1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ptchd4B9EKX1 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ptchd4B9EKX1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptchd4B9EKX1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptchd4B9EKX1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptchd4B9EKX1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ptchd4B9EKX1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ptchd4B9EKX1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ptchd4B9EKX1 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ptchd4B9EKX1 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ptchd4B9EKX1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ptchd4B9EKX1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ptchd4B9EKX1 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.64■□□□□ 0.57
Ptchd4B9EKX1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ptchd4B9EKX1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ptchd4B9EKX1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ptchd4B9EKX1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ptchd4B9EKX1 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ptchd4B9EKX1 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ptchd4B9EKX1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ptchd4B9EKX1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ptchd4B9EKX1 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ptchd4B9EKX1 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ptchd4B9EKX1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ptchd4B9EKX1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ptchd4B9EKX1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ptchd4B9EKX1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ptchd4B9EKX1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.64■□□□□ 0.57
Ptchd4B9EKX1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ptchd4B9EKX1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.64■□□□□ 0.57
Ptchd4B9EKX1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.64■□□□□ 0.57
Ptchd4B9EKX1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ptchd4B9EKX1 Actl10-202ENSMUST00000226583 1501 ntBASIC18.64■□□□□ 0.57
Ptchd4B9EKX1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ptchd4B9EKX1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ptchd4B9EKX1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ptchd4B9EKX1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ptchd4B9EKX1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ptchd4B9EKX1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ptchd4B9EKX1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ptchd4B9EKX1 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ptchd4B9EKX1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ptchd4B9EKX1 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ptchd4B9EKX1 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ptchd4B9EKX1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ptchd4B9EKX1 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ptchd4B9EKX1 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ptchd4B9EKX1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ptchd4B9EKX1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.63■□□□□ 0.57
Ptchd4B9EKX1 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ptchd4B9EKX1 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ptchd4B9EKX1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ptchd4B9EKX1 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ptchd4B9EKX1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ptchd4B9EKX1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms