Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Chd3B1AR17 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chd3B1AR17 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chd3B1AR17 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chd3B1AR17 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chd3B1AR17 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chd3B1AR17 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.02■□□□□ 0.32
Chd3B1AR17 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Chd3B1AR17 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chd3B1AR17 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.02■□□□□ 0.32
Chd3B1AR17 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.02■□□□□ 0.31
Chd3B1AR17 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chd3B1AR17 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chd3B1AR17 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chd3B1AR17 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chd3B1AR17 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chd3B1AR17 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chd3B1AR17 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd3B1AR17 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd3B1AR17 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Chd3B1AR17 Gm6345-202ENSMUST00000180900 204 ntBASIC17.01■□□□□ 0.31
Chd3B1AR17 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.01■□□□□ 0.31
Chd3B1AR17 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.01■□□□□ 0.31
Chd3B1AR17 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Chd3B1AR17 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd3B1AR17 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd3B1AR17 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd3B1AR17 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chd3B1AR17 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chd3B1AR17 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Chd3B1AR17 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd3B1AR17 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd3B1AR17 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Chd3B1AR17 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd3B1AR17 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chd3B1AR17 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Chd3B1AR17 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Chd3B1AR17 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Chd3B1AR17 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Chd3B1AR17 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chd3B1AR17 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Chd3B1AR17 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chd3B1AR17 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17■□□□□ 0.31
Chd3B1AR17 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17■□□□□ 0.31
Chd3B1AR17 Mir1668-201ENSMUST00000184114 107 ntBASIC17■□□□□ 0.31
Chd3B1AR17 Gm5587-201ENSMUST00000206270 674 ntBASIC17■□□□□ 0.31
Chd3B1AR17 AC120002.2-201ENSMUST00000220205 773 ntBASIC17■□□□□ 0.31
Chd3B1AR17 Gm7367-201ENSMUST00000057611 492 ntBASIC17■□□□□ 0.31
Chd3B1AR17 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17■□□□□ 0.31
Chd3B1AR17 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chd3B1AR17 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Chd3B1AR17 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17■□□□□ 0.31
Chd3B1AR17 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Chd3B1AR17 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Chd3B1AR17 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chd3B1AR17 Gm9013-201ENSMUST00000132939 882 ntBASIC17■□□□□ 0.31
Chd3B1AR17 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17■□□□□ 0.31
Chd3B1AR17 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chd3B1AR17 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Chd3B1AR17 Il3ra-202ENSMUST00000223589 738 ntBASIC17■□□□□ 0.31
Chd3B1AR17 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17■□□□□ 0.31
Chd3B1AR17 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Chd3B1AR17 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chd3B1AR17 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chd3B1AR17 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chd3B1AR17 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chd3B1AR17 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.99■□□□□ 0.31
Chd3B1AR17 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chd3B1AR17 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chd3B1AR17 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chd3B1AR17 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chd3B1AR17 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.99■□□□□ 0.31
Chd3B1AR17 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd3B1AR17 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd3B1AR17 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd3B1AR17 Rarb-207ENSMUST00000225921 2756 ntBASIC16.98■□□□□ 0.31
Chd3B1AR17 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd3B1AR17 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Chd3B1AR17 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Chd3B1AR17 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd3B1AR17 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd3B1AR17 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd3B1AR17 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd3B1AR17 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Chd3B1AR17 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd3B1AR17 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd3B1AR17 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Chd3B1AR17 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.97■□□□□ 0.31
Chd3B1AR17 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd3B1AR17 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Chd3B1AR17 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd3B1AR17 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd3B1AR17 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd3B1AR17 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd3B1AR17 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd3B1AR17 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Chd3B1AR17 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd3B1AR17 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.97■□□□□ 0.31
Chd3B1AR17 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd3B1AR17 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms