Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Chd6A3KFM7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd6A3KFM7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd6A3KFM7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd6A3KFM7 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd6A3KFM7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Chd6A3KFM7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Chd6A3KFM7 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Chd6A3KFM7 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd6A3KFM7 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd6A3KFM7 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd6A3KFM7 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd6A3KFM7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chd6A3KFM7 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd6A3KFM7 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Chd6A3KFM7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Chd6A3KFM7 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.14□□□□□ -0.15
Chd6A3KFM7 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd6A3KFM7 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd6A3KFM7 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd6A3KFM7 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.14□□□□□ -0.15
Chd6A3KFM7 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.14□□□□□ -0.15
Chd6A3KFM7 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.14□□□□□ -0.15
Chd6A3KFM7 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd6A3KFM7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd6A3KFM7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.14□□□□□ -0.15
Chd6A3KFM7 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd6A3KFM7 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chd6A3KFM7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC14.14□□□□□ -0.15
Chd6A3KFM7 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd6A3KFM7 Gm20949-201ENSMUST00000206478 952 ntBASIC14.14□□□□□ -0.15
Chd6A3KFM7 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chd6A3KFM7 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.13□□□□□ -0.15
Chd6A3KFM7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd6A3KFM7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd6A3KFM7 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd6A3KFM7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd6A3KFM7 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.13□□□□□ -0.15
Chd6A3KFM7 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd6A3KFM7 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.13□□□□□ -0.15
Chd6A3KFM7 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Chd6A3KFM7 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd6A3KFM7 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd6A3KFM7 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd6A3KFM7 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd6A3KFM7 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd6A3KFM7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd6A3KFM7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chd6A3KFM7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Chd6A3KFM7 Golph3-202ENSMUST00000226517 2359 ntBASIC14.13□□□□□ -0.15
Chd6A3KFM7 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd6A3KFM7 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd6A3KFM7 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Chd6A3KFM7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chd6A3KFM7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd6A3KFM7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd6A3KFM7 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC14.12□□□□□ -0.15
Chd6A3KFM7 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.12□□□□□ -0.15
Chd6A3KFM7 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.12□□□□□ -0.15
Chd6A3KFM7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd6A3KFM7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd6A3KFM7 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd6A3KFM7 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Chd6A3KFM7 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd6A3KFM7 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.12□□□□□ -0.15
Chd6A3KFM7 Gm4535-201ENSMUST00000182274 558 ntBASIC14.12□□□□□ -0.15
Chd6A3KFM7 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.12□□□□□ -0.15
Chd6A3KFM7 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd6A3KFM7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chd6A3KFM7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Chd6A3KFM7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd6A3KFM7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chd6A3KFM7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd6A3KFM7 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd6A3KFM7 Mir7023-201ENSMUST00000185093 64 ntBASIC14.11□□□□□ -0.15
Chd6A3KFM7 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
Chd6A3KFM7 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd6A3KFM7 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd6A3KFM7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.11□□□□□ -0.15
Chd6A3KFM7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd6A3KFM7 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd6A3KFM7 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd6A3KFM7 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd6A3KFM7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chd6A3KFM7 Gm9731-201ENSMUST00000209480 747 ntBASIC14.11□□□□□ -0.15
Chd6A3KFM7 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Chd6A3KFM7 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chd6A3KFM7 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Chd6A3KFM7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd6A3KFM7 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.11□□□□□ -0.15
Chd6A3KFM7 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.1□□□□□ -0.15
Chd6A3KFM7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chd6A3KFM7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd6A3KFM7 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.1□□□□□ -0.15
Chd6A3KFM7 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.1□□□□□ -0.15
Chd6A3KFM7 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd6A3KFM7 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chd6A3KFM7 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chd6A3KFM7 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd6A3KFM7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms