Protein–RNA interactions for Protein: A0A140T8T4

Rpl9-ps6, Ribosomal protein L9, pseudogene 6, mousemouse

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl9-ps6A0A140T8T4 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rpl9-ps6A0A140T8T4 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rpl9-ps6A0A140T8T4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rpl9-ps6A0A140T8T4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.83■□□□□ 0.45
Rpl9-ps6A0A140T8T4 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rpl9-ps6A0A140T8T4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.83■□□□□ 0.44
Rpl9-ps6A0A140T8T4 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.83■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rpl9-ps6A0A140T8T4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.82■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Gm18959-201ENSMUST00000208954 655 ntBASIC17.82■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Rpl9-ps6A0A140T8T4 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpl9-ps6A0A140T8T4 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.82■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.81■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Gm10231-201ENSMUST00000181584 441 ntBASIC17.81■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Gm10175-202ENSMUST00000208752 441 ntBASIC17.81■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.81■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.8■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpl9-ps6A0A140T8T4 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.8■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.8■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.8■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Gm45058-201ENSMUST00000205810 766 ntBASIC17.8■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.8■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpl9-ps6A0A140T8T4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.79■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.78■□□□□ 0.44
Rpl9-ps6A0A140T8T4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms