Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv13-2A0A140T8N6 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv13-2A0A140T8N6 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Trbv13-2A0A140T8N6 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.11□□□□□ -0.47
Trbv13-2A0A140T8N6 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
Trbv13-2A0A140T8N6 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trbv13-2A0A140T8N6 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trbv13-2A0A140T8N6 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-2A0A140T8N6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-2A0A140T8N6 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-2A0A140T8N6 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trbv13-2A0A140T8N6 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-2A0A140T8N6 Gm5643-201ENSMUST00000117081 966 ntBASIC12.11□□□□□ -0.47
Trbv13-2A0A140T8N6 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC12.11□□□□□ -0.47
Trbv13-2A0A140T8N6 Gm6576-201ENSMUST00000169678 883 ntBASIC12.11□□□□□ -0.47
Trbv13-2A0A140T8N6 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.11□□□□□ -0.47
Trbv13-2A0A140T8N6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trbv13-2A0A140T8N6 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-2A0A140T8N6 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC12.11□□□□□ -0.47
Trbv13-2A0A140T8N6 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-2A0A140T8N6 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-2A0A140T8N6 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-2A0A140T8N6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-2A0A140T8N6 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trbv13-2A0A140T8N6 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-2A0A140T8N6 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-2A0A140T8N6 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 Gm12382-201ENSMUST00000122005 922 ntBASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-2A0A140T8N6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-2A0A140T8N6 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-2A0A140T8N6 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-2A0A140T8N6 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-2A0A140T8N6 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-2A0A140T8N6 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-2A0A140T8N6 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-2A0A140T8N6 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trbv13-2A0A140T8N6 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trbv13-2A0A140T8N6 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC12.09□□□□□ -0.47
Trbv13-2A0A140T8N6 Gm13168-201ENSMUST00000121771 632 ntBASIC12.09□□□□□ -0.47
Trbv13-2A0A140T8N6 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC12.09□□□□□ -0.47
Trbv13-2A0A140T8N6 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.09□□□□□ -0.47
Trbv13-2A0A140T8N6 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-2A0A140T8N6 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-2A0A140T8N6 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC12.09□□□□□ -0.47
Trbv13-2A0A140T8N6 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-2A0A140T8N6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-2A0A140T8N6 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-2A0A140T8N6 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.09□□□□□ -0.47
Trbv13-2A0A140T8N6 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-2A0A140T8N6 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-2A0A140T8N6 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trbv13-2A0A140T8N6 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trbv13-2A0A140T8N6 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trbv13-2A0A140T8N6 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trbv13-2A0A140T8N6 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Trbv13-2A0A140T8N6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-2A0A140T8N6 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-2A0A140T8N6 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-2A0A140T8N6 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-2A0A140T8N6 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-2A0A140T8N6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-2A0A140T8N6 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-2A0A140T8N6 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Trbv13-2A0A140T8N6 Gm15378-201ENSMUST00000121894 207 ntBASIC12.08□□□□□ -0.48
Trbv13-2A0A140T8N6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-2A0A140T8N6 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-2A0A140T8N6 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-2A0A140T8N6 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-2A0A140T8N6 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms