Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv1-88A0A140T8N1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv1-88A0A140T8N1 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv1-88A0A140T8N1 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv1-88A0A140T8N1 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv1-88A0A140T8N1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Igkv1-88A0A140T8N1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv1-88A0A140T8N1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv1-88A0A140T8N1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv1-88A0A140T8N1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC11.51□□□□□ -0.57
Igkv1-88A0A140T8N1 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC11.51□□□□□ -0.57
Igkv1-88A0A140T8N1 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv1-88A0A140T8N1 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC11.5□□□□□ -0.57
Igkv1-88A0A140T8N1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv1-88A0A140T8N1 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv1-88A0A140T8N1 Gm43294-201ENSMUST00000202850 2490 ntBASIC11.5□□□□□ -0.57
Igkv1-88A0A140T8N1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv1-88A0A140T8N1 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv1-88A0A140T8N1 Gm6598-201ENSMUST00000202719 2615 ntBASIC11.5□□□□□ -0.57
Igkv1-88A0A140T8N1 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Igkv1-88A0A140T8N1 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv1-88A0A140T8N1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Igkv1-88A0A140T8N1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC11.5□□□□□ -0.57
Igkv1-88A0A140T8N1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Igkv1-88A0A140T8N1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv1-88A0A140T8N1 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Igkv1-88A0A140T8N1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv1-88A0A140T8N1 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Igkv1-88A0A140T8N1 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC11.5□□□□□ -0.57
Igkv1-88A0A140T8N1 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC11.5□□□□□ -0.57
Igkv1-88A0A140T8N1 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv1-88A0A140T8N1 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Igkv1-88A0A140T8N1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Igkv1-88A0A140T8N1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv1-88A0A140T8N1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Igkv1-88A0A140T8N1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv1-88A0A140T8N1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv1-88A0A140T8N1 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv1-88A0A140T8N1 Gm5898-201ENSMUST00000121016 2071 ntBASIC11.48□□□□□ -0.57
Igkv1-88A0A140T8N1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv1-88A0A140T8N1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv1-88A0A140T8N1 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv1-88A0A140T8N1 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Igkv1-88A0A140T8N1 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv1-88A0A140T8N1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv1-88A0A140T8N1 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv1-88A0A140T8N1 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv1-88A0A140T8N1 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Igkv1-88A0A140T8N1 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv1-88A0A140T8N1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv1-88A0A140T8N1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Igkv1-88A0A140T8N1 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Igkv1-88A0A140T8N1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Igkv1-88A0A140T8N1 Nespas-201ENSMUST00000143738 1083 ntBASIC11.48□□□□□ -0.57
Igkv1-88A0A140T8N1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC11.48□□□□□ -0.57
Igkv1-88A0A140T8N1 Gm8969-201ENSMUST00000199694 526 ntBASIC11.48□□□□□ -0.57
Igkv1-88A0A140T8N1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Igkv1-88A0A140T8N1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv1-88A0A140T8N1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv1-88A0A140T8N1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC11.48□□□□□ -0.57
Igkv1-88A0A140T8N1 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv1-88A0A140T8N1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv1-88A0A140T8N1 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv1-88A0A140T8N1 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv1-88A0A140T8N1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv1-88A0A140T8N1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms