Protein–RNA interactions for Protein: A0A140LHH9

Gm35339, Predicted gene, 35339, mousemouse

Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35339A0A140LHH9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
Gm35339A0A140LHH9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC36.52■■■■□ 3.44
Gm35339A0A140LHH9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC36.52■■■■□ 3.44
Gm35339A0A140LHH9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC36.52■■■■□ 3.44
Gm35339A0A140LHH9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC36.52■■■■□ 3.44
Gm35339A0A140LHH9 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
Gm35339A0A140LHH9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC36.51■■■■□ 3.44
Gm35339A0A140LHH9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC36.51■■■■□ 3.44
Gm35339A0A140LHH9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC36.51■■■■□ 3.44
Gm35339A0A140LHH9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC36.51■■■■□ 3.44
Gm35339A0A140LHH9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC36.51■■■■□ 3.43
Gm35339A0A140LHH9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC36.51■■■■□ 3.43
Gm35339A0A140LHH9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC36.51■■■■□ 3.43
Gm35339A0A140LHH9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC36.5■■■■□ 3.43
Gm35339A0A140LHH9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC36.5■■■■□ 3.43
Gm35339A0A140LHH9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC36.5■■■■□ 3.43
Gm35339A0A140LHH9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC36.5■■■■□ 3.43
Gm35339A0A140LHH9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC36.5■■■■□ 3.43
Gm35339A0A140LHH9 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC36.5■■■■□ 3.43
Gm35339A0A140LHH9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC36.5■■■■□ 3.43
Gm35339A0A140LHH9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC36.5■■■■□ 3.43
Gm35339A0A140LHH9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC36.49■■■■□ 3.43
Gm35339A0A140LHH9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC36.49■■■■□ 3.43
Gm35339A0A140LHH9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC36.49■■■■□ 3.43
Gm35339A0A140LHH9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC36.49■■■■□ 3.43
Gm35339A0A140LHH9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC36.49■■■■□ 3.43
Gm35339A0A140LHH9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC36.49■■■■□ 3.43
Gm35339A0A140LHH9 Gm7862-201ENSMUST00000121461 292 ntBASIC36.48■■■■□ 3.43
Gm35339A0A140LHH9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC36.48■■■■□ 3.43
Gm35339A0A140LHH9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC36.48■■■■□ 3.43
Gm35339A0A140LHH9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC36.48■■■■□ 3.43
Gm35339A0A140LHH9 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC36.48■■■■□ 3.43
Gm35339A0A140LHH9 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC36.48■■■■□ 3.43
Gm35339A0A140LHH9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC36.48■■■■□ 3.43
Gm35339A0A140LHH9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC36.47■■■■□ 3.43
Gm35339A0A140LHH9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC36.47■■■■□ 3.43
Gm35339A0A140LHH9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC36.47■■■■□ 3.43
Gm35339A0A140LHH9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC36.47■■■■□ 3.43
Gm35339A0A140LHH9 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC36.47■■■■□ 3.43
Gm35339A0A140LHH9 Gm43332-201ENSMUST00000202511 1044 ntBASIC36.47■■■■□ 3.43
Gm35339A0A140LHH9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC36.47■■■■□ 3.43
Gm35339A0A140LHH9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC36.47■■■■□ 3.43
Gm35339A0A140LHH9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC36.46■■■■□ 3.43
Gm35339A0A140LHH9 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
Gm35339A0A140LHH9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC36.46■■■■□ 3.43
Gm35339A0A140LHH9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC36.46■■■■□ 3.43
Gm35339A0A140LHH9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC36.46■■■■□ 3.43
Gm35339A0A140LHH9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
Gm35339A0A140LHH9 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC36.45■■■■□ 3.43
Gm35339A0A140LHH9 Gm11594-201ENSMUST00000122313 162 ntBASIC36.45■■■■□ 3.43
Gm35339A0A140LHH9 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC36.45■■■■□ 3.43
Gm35339A0A140LHH9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
Gm35339A0A140LHH9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
Gm35339A0A140LHH9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC36.45■■■■□ 3.43
Gm35339A0A140LHH9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC36.45■■■■□ 3.43
Gm35339A0A140LHH9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
Gm35339A0A140LHH9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC36.45■■■■□ 3.43
Gm35339A0A140LHH9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
Gm35339A0A140LHH9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.42
Gm35339A0A140LHH9 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC36.45■■■■□ 3.42
Gm35339A0A140LHH9 Gm8000-201ENSMUST00000188378 592 ntBASIC36.45■■■■□ 3.42
Gm35339A0A140LHH9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC36.45■■■■□ 3.42
Gm35339A0A140LHH9 AC108846.1-201ENSMUST00000214531 513 ntBASIC36.45■■■■□ 3.42
Gm35339A0A140LHH9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.42
Gm35339A0A140LHH9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.42
Gm35339A0A140LHH9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC36.44■■■■□ 3.42
Gm35339A0A140LHH9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC36.44■■■■□ 3.42
Gm35339A0A140LHH9 Gm15165-201ENSMUST00000118140 502 ntBASIC36.44■■■■□ 3.42
Gm35339A0A140LHH9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC36.44■■■■□ 3.42
Gm35339A0A140LHH9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC36.43■■■■□ 3.42
Gm35339A0A140LHH9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC36.43■■■■□ 3.42
Gm35339A0A140LHH9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC36.43■■■■□ 3.42
Gm35339A0A140LHH9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC36.43■■■■□ 3.42
Gm35339A0A140LHH9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
Gm35339A0A140LHH9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC36.43■■■■□ 3.42
Gm35339A0A140LHH9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC36.42■■■■□ 3.42
Gm35339A0A140LHH9 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC36.42■■■■□ 3.42
Gm35339A0A140LHH9 Gm27702-201ENSMUST00000184512 56 ntBASIC36.42■■■■□ 3.42
Gm35339A0A140LHH9 Gm27867-201ENSMUST00000184778 125 ntBASIC36.42■■■■□ 3.42
Gm35339A0A140LHH9 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC36.42■■■■□ 3.42
Gm35339A0A140LHH9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC36.42■■■■□ 3.42
Gm35339A0A140LHH9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC36.42■■■■□ 3.42
Gm35339A0A140LHH9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC36.42■■■■□ 3.42
Gm35339A0A140LHH9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC36.42■■■■□ 3.42
Gm35339A0A140LHH9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC36.42■■■■□ 3.42
Gm35339A0A140LHH9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC36.41■■■■□ 3.42
Gm35339A0A140LHH9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
Gm35339A0A140LHH9 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
Gm35339A0A140LHH9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC36.41■■■■□ 3.42
Gm35339A0A140LHH9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
Gm35339A0A140LHH9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC36.41■■■■□ 3.42
Gm35339A0A140LHH9 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
Gm35339A0A140LHH9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC36.41■■■■□ 3.42
Gm35339A0A140LHH9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
Gm35339A0A140LHH9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC36.41■■■■□ 3.42
Gm35339A0A140LHH9 Gm13312-201ENSMUST00000119631 718 ntBASIC36.41■■■■□ 3.42
Gm35339A0A140LHH9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC36.4■■■■□ 3.42
Gm35339A0A140LHH9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC36.4■■■■□ 3.42
Gm35339A0A140LHH9 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC36.4■■■■□ 3.42
Gm35339A0A140LHH9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC36.4■■■■□ 3.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms