Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav19A0A0B4J1K4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav19A0A0B4J1K4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav19A0A0B4J1K4 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav19A0A0B4J1K4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav19A0A0B4J1K4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav19A0A0B4J1K4 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav19A0A0B4J1K4 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav19A0A0B4J1K4 Gm10129-202ENSMUST00000193100 1316 ntBASIC13.02□□□□□ -0.33
Trav19A0A0B4J1K4 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav19A0A0B4J1K4 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav19A0A0B4J1K4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav19A0A0B4J1K4 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav19A0A0B4J1K4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav19A0A0B4J1K4 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav19A0A0B4J1K4 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav19A0A0B4J1K4 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav19A0A0B4J1K4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav19A0A0B4J1K4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav19A0A0B4J1K4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav19A0A0B4J1K4 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav19A0A0B4J1K4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav19A0A0B4J1K4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav19A0A0B4J1K4 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav19A0A0B4J1K4 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav19A0A0B4J1K4 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav19A0A0B4J1K4 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.01□□□□□ -0.33
Trav19A0A0B4J1K4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav19A0A0B4J1K4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav19A0A0B4J1K4 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav19A0A0B4J1K4 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav19A0A0B4J1K4 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav19A0A0B4J1K4 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trav19A0A0B4J1K4 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav19A0A0B4J1K4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav19A0A0B4J1K4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Trav19A0A0B4J1K4 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav19A0A0B4J1K4 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav19A0A0B4J1K4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav19A0A0B4J1K4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav19A0A0B4J1K4 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav19A0A0B4J1K4 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav19A0A0B4J1K4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav19A0A0B4J1K4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav19A0A0B4J1K4 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav19A0A0B4J1K4 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav19A0A0B4J1K4 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav19A0A0B4J1K4 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav19A0A0B4J1K4 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav19A0A0B4J1K4 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav19A0A0B4J1K4 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav19A0A0B4J1K4 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav19A0A0B4J1K4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC13□□□□□ -0.33
Trav19A0A0B4J1K4 Gm10418-201ENSMUST00000100943 576 ntBASIC13□□□□□ -0.33
Trav19A0A0B4J1K4 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav19A0A0B4J1K4 Gm2011-201ENSMUST00000203124 1263 ntBASIC13□□□□□ -0.33
Trav19A0A0B4J1K4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav19A0A0B4J1K4 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav19A0A0B4J1K4 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav19A0A0B4J1K4 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav19A0A0B4J1K4 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav19A0A0B4J1K4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav19A0A0B4J1K4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav19A0A0B4J1K4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav19A0A0B4J1K4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav19A0A0B4J1K4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav19A0A0B4J1K4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav19A0A0B4J1K4 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav19A0A0B4J1K4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav19A0A0B4J1K4 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav19A0A0B4J1K4 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav19A0A0B4J1K4 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav19A0A0B4J1K4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav19A0A0B4J1K4 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav19A0A0B4J1K4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav19A0A0B4J1K4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav19A0A0B4J1K4 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav19A0A0B4J1K4 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav19A0A0B4J1K4 Gm29791-202ENSMUST00000207888 369 ntBASIC12.99□□□□□ -0.33
Trav19A0A0B4J1K4 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav19A0A0B4J1K4 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav19A0A0B4J1K4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav19A0A0B4J1K4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav19A0A0B4J1K4 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav19A0A0B4J1K4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
Trav19A0A0B4J1K4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav19A0A0B4J1K4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav19A0A0B4J1K4 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav19A0A0B4J1K4 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav19A0A0B4J1K4 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav19A0A0B4J1K4 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav19A0A0B4J1K4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav19A0A0B4J1K4 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav19A0A0B4J1K4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav19A0A0B4J1K4 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav19A0A0B4J1K4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC12.98□□□□□ -0.33
Trav19A0A0B4J1K4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav19A0A0B4J1K4 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav19A0A0B4J1K4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav19A0A0B4J1K4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms