Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-4A0A0B4J1K2 Mir1199-201ENSMUST00000117015 119 ntBASIC13.05□□□□□ -0.32
Trav9-4A0A0B4J1K2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Trav9-4A0A0B4J1K2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-4A0A0B4J1K2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC13.05□□□□□ -0.32
Trav9-4A0A0B4J1K2 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.05□□□□□ -0.32
Trav9-4A0A0B4J1K2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-4A0A0B4J1K2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-4A0A0B4J1K2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-4A0A0B4J1K2 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-4A0A0B4J1K2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-4A0A0B4J1K2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC13.05□□□□□ -0.32
Trav9-4A0A0B4J1K2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-4A0A0B4J1K2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 Gm44832-201ENSMUST00000208849 2303 ntBASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 Gm10517-202ENSMUST00000192970 758 ntBASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9-4A0A0B4J1K2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-4A0A0B4J1K2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav9-4A0A0B4J1K2 Gm37811-201ENSMUST00000192416 2601 ntBASIC13.03□□□□□ -0.32
Trav9-4A0A0B4J1K2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-4A0A0B4J1K2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-4A0A0B4J1K2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-4A0A0B4J1K2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-4A0A0B4J1K2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-4A0A0B4J1K2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-4A0A0B4J1K2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-4A0A0B4J1K2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-4A0A0B4J1K2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-4A0A0B4J1K2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav9-4A0A0B4J1K2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav9-4A0A0B4J1K2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
Trav9-4A0A0B4J1K2 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.03□□□□□ -0.32
Trav9-4A0A0B4J1K2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-4A0A0B4J1K2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav9-4A0A0B4J1K2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC13.03□□□□□ -0.32
Trav9-4A0A0B4J1K2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-4A0A0B4J1K2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-4A0A0B4J1K2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-4A0A0B4J1K2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-4A0A0B4J1K2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav9-4A0A0B4J1K2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Trav9-4A0A0B4J1K2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9-4A0A0B4J1K2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav9-4A0A0B4J1K2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trav9-4A0A0B4J1K2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trav9-4A0A0B4J1K2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9-4A0A0B4J1K2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9-4A0A0B4J1K2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.32
Trav9-4A0A0B4J1K2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9-4A0A0B4J1K2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trav9-4A0A0B4J1K2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9-4A0A0B4J1K2 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.02□□□□□ -0.33
Trav9-4A0A0B4J1K2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9-4A0A0B4J1K2 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav9-4A0A0B4J1K2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav9-4A0A0B4J1K2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav9-4A0A0B4J1K2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9-4A0A0B4J1K2 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9-4A0A0B4J1K2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9-4A0A0B4J1K2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Trav9-4A0A0B4J1K2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9-4A0A0B4J1K2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Trav9-4A0A0B4J1K2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9-4A0A0B4J1K2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9-4A0A0B4J1K2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.02□□□□□ -0.33
Trav9-4A0A0B4J1K2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9-4A0A0B4J1K2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms