Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Hivep3-201ENSMUST00000084306 2973 ntBASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4-3A0A0B4J1K1 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4-3A0A0B4J1K1 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4-3A0A0B4J1K1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4-3A0A0B4J1K1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4-3A0A0B4J1K1 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4-3A0A0B4J1K1 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4-3A0A0B4J1K1 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4-3A0A0B4J1K1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4-3A0A0B4J1K1 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4-3A0A0B4J1K1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4-3A0A0B4J1K1 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4-3A0A0B4J1K1 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4-3A0A0B4J1K1 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4-3A0A0B4J1K1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC11.87□□□□□ -0.51
Trav4-3A0A0B4J1K1 Golgb1-201ENSMUST00000023534 498 ntBASIC11.87□□□□□ -0.51
Trav4-3A0A0B4J1K1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav4-3A0A0B4J1K1 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4-3A0A0B4J1K1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4-3A0A0B4J1K1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4-3A0A0B4J1K1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Trav4-3A0A0B4J1K1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav4-3A0A0B4J1K1 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4-3A0A0B4J1K1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4-3A0A0B4J1K1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4-3A0A0B4J1K1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4-3A0A0B4J1K1 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav4-3A0A0B4J1K1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4-3A0A0B4J1K1 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4-3A0A0B4J1K1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4-3A0A0B4J1K1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4-3A0A0B4J1K1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4-3A0A0B4J1K1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4-3A0A0B4J1K1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4-3A0A0B4J1K1 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav4-3A0A0B4J1K1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4-3A0A0B4J1K1 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4-3A0A0B4J1K1 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav4-3A0A0B4J1K1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4-3A0A0B4J1K1 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4-3A0A0B4J1K1 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4-3A0A0B4J1K1 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4-3A0A0B4J1K1 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4-3A0A0B4J1K1 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav4-3A0A0B4J1K1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4-3A0A0B4J1K1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC11.86□□□□□ -0.51
Trav4-3A0A0B4J1K1 Gm15820-201ENSMUST00000201566 728 ntBASIC11.86□□□□□ -0.51
Trav4-3A0A0B4J1K1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4-3A0A0B4J1K1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4-3A0A0B4J1K1 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
Trav4-3A0A0B4J1K1 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4-3A0A0B4J1K1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav4-3A0A0B4J1K1 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4-3A0A0B4J1K1 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4-3A0A0B4J1K1 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav4-3A0A0B4J1K1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4-3A0A0B4J1K1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4-3A0A0B4J1K1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav4-3A0A0B4J1K1 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4-3A0A0B4J1K1 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4-3A0A0B4J1K1 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Trav4-3A0A0B4J1K1 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4-3A0A0B4J1K1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4-3A0A0B4J1K1 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4-3A0A0B4J1K1 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4-3A0A0B4J1K1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4-3A0A0B4J1K1 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4-3A0A0B4J1K1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4-3A0A0B4J1K1 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4-3A0A0B4J1K1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav4-3A0A0B4J1K1 Gm5522-201ENSMUST00000189483 1242 ntBASIC11.85□□□□□ -0.51
Trav4-3A0A0B4J1K1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4-3A0A0B4J1K1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4-3A0A0B4J1K1 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4-3A0A0B4J1K1 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4-3A0A0B4J1K1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4-3A0A0B4J1K1 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav4-3A0A0B4J1K1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4-3A0A0B4J1K1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4-3A0A0B4J1K1 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4-3A0A0B4J1K1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4-3A0A0B4J1K1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4-3A0A0B4J1K1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4-3A0A0B4J1K1 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4-3A0A0B4J1K1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav4-3A0A0B4J1K1 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4-3A0A0B4J1K1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4-3A0A0B4J1K1 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav4-3A0A0B4J1K1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav4-3A0A0B4J1K1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4-3A0A0B4J1K1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4-3A0A0B4J1K1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Trav4-3A0A0B4J1K1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav4-3A0A0B4J1K1 Mir8112-201ENSMUST00000184382 131 ntBASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms